Pairwise Alignments

Query, 324 a.a., Cys regulon transcriptional activator CysB from Pseudomonas fluorescens FW300-N2E2

Subject, 324 a.a., HTH-type transcriptional regulator CysB from Vibrio cholerae E7946 ATCC 55056

 Score =  441 bits (1135), Expect = e-129
 Identities = 212/323 (65%), Positives = 266/323 (82%)

Query: 1   MKLQQLRYIWEVAHHDLNVSATAQSLYTSQPGISKQIRLLEDELGVEVFARSGKHLTRVT 60
           MKLQQL+YI EV +H+LNVSATA++LYTSQPGISKQ+RLLEDELG+++F RSGKHLT+VT
Sbjct: 1   MKLQQLKYIVEVVNHNLNVSATAENLYTSQPGISKQVRLLEDELGIQIFERSGKHLTQVT 60

Query: 61  PAGERIITTAGEILRKVESIKQIAQEFSNEKKGTLSIATTHTQARYALPPVISNFIKQYP 120
           PAGE I+  A EIL +VESIK +A E ++ + GTL+I+TTHTQARYALP VI  F K+YP
Sbjct: 61  PAGEHIVRIATEILSRVESIKAVAAEHTHPEMGTLNISTTHTQARYALPEVIKGFTKRYP 120

Query: 121 DVALHMHQGSPMQIAEMAADGTVDFAIATEALELFGDLVMMPCYRWNRCVVVPQGHPLTK 180
            V+LHMHQG+P Q++E  A GT +FAIATEAL L+ D +M+PCY WNR +VVP+ HPLTK
Sbjct: 121 RVSLHMHQGTPTQMSEAIAKGTANFAIATEALHLYQDAIMLPCYHWNRSIVVPKDHPLTK 180

Query: 181 LPKLTLEALAEYPIVTYVFGFTGRSKLDEAFSHRGLTPKVVFTAADADVIKTYVRLGLGV 240
             ++T+E LA YP+VTYVFGFTGRS+LD AF+  G+TPKVVFTA DADVIKTYVR+G+GV
Sbjct: 181 KEQVTIEDLAAYPLVTYVFGFTGRSELDSAFNRVGMTPKVVFTATDADVIKTYVRMGIGV 240

Query: 241 GIVAKMAVDTKLDSDLVVLDASELFESSVTKIGFRRGTFLRGFMCDFIEKFAPHLTREVM 300
           G++A MAVD K D+DLV +DAS +F +S T IGFRRGTFLR +M DF+E+FAPHLTR V+
Sbjct: 241 GVIASMAVDKKQDTDLVAIDASHIFSASTTSIGFRRGTFLRSYMFDFMERFAPHLTRPVV 300

Query: 301 AKAIQCHNKQELEELFDGVELPV 323
            +AI   +  E+ E+F  ++LPV
Sbjct: 301 EQAISLKSNIEIAEMFKDIDLPV 323