Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 304 a.a., LysR substrate-binding domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  187 bits (475), Expect = 3e-52
 Identities = 102/279 (36%), Positives = 162/279 (58%), Gaps = 4/279 (1%)

Query: 16  IDTEVLRTFVAIADQGGFTRAGELVNRTQSAVSMQMKRLEEDVLQRRLFERDGRQVKLTA 75
           +D  +L+TF+ +   G F+     + RTQ AVS+Q+ RLEE      LF + GR++ LT 
Sbjct: 5   LDLRLLQTFIVLVQTGSFSETSRRLGRTQPAVSLQLNRLEE-ATGAPLFTKVGRKLVLTN 63

Query: 76  EGQVLLGYARRILKLHSEVFNTLREPHMVGTVRIGTPDDYVMRFLPGILQRFAQFYPLIE 135
            G+++LGYAR I+ L  E+   L  P + G V +G PD Y    LPGIL  F   YP ++
Sbjct: 64  HGELVLGYARTIMGLQDELRARLAAPKLDGVVVLGMPDLYAAYLLPGILADFRSAYPNVD 123

Query: 136 IEVHCESSKQLLL---RQDLDLSIVTRKPGDEIGQLLRKERFVWAEAACFNVHEQTPLPL 192
           +E+ C  S +L+    R ++DL+IVT  P  ++G+L+ +E  VW  +   +VH + P+PL
Sbjct: 124 VELKCALSSKLMASVERAEIDLAIVTGMPAFKVGELVAQEELVWVASERSSVHLENPVPL 183

Query: 193 AMFNSDCFCRQWACNALDAMGRDYRVAYNSSSLSALMAVVGAGLAITAQLESLLTPDMRV 252
           AM       R +   AL+++GR +R++  S S+S + A V +G+A++   +S + P MR+
Sbjct: 184 AMLPPGNIFRDFGLAALESIGRIWRLSCISESISGIQAAVFSGIAVSVVGKSSVLPGMRI 243

Query: 253 LGEAEDLPELPEASIMLIRNLHNPSPITECLAEHIVEGF 291
           LG  +  P LP+  ++L R+  + +P  E LA  IV  F
Sbjct: 244 LGRGDTFPALPKVDLVLYRSARSSNPAAEALASVIVRHF 282