Pairwise Alignments

Query, 251 a.a., Spermidine synthase (EC 2.5.1.16) from Pseudomonas fluorescens FW300-N2E2

Subject, 247 a.a., hypothetical spermidine synthase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  122 bits (307), Expect = 5e-33
 Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 7/244 (2%)

Query: 9   LLAEVHDEFGMIRVFEVADYRFLEFGDAIEQSCVFTADPSWLEYDYTRAMLIGALCHEQP 68
           LL E HD FG IRV +  D R L FGD  EQS +    P   ++ Y + M++  L   +P
Sbjct: 6   LLHETHDTFGPIRVLDYGDSRVLSFGDNDEQSKILKTAPHIPQHTYVQGMML-VLLFCKP 64

Query: 69  ESALFLGLGAGTLTQACLKFLPLEDVEAIELRPDVPRLAIEYLGLDDDPRLYIRVGDALE 128
           +SA+ LGLG G L     +F     + A+ELRP V  LA  Y  L    +L +   DAL 
Sbjct: 65  KSAIVLGLGGGALIHVLRRFDAAIKLTAVELRPTVIELAKHYFQLPIGKKLNVINDDALV 124

Query: 129 LLESAE--PADLIFVDLYTDVGPGVGHLAWGFLENCQKRLNPGGWLVINQWAT-DDGKPL 185
            + SAE    D+IF D+Y+  G   G L+  FLE C +R+ P G+LV+N W      + L
Sbjct: 125 FMASAEHKKVDVIFADIYSAKGVNTGQLSATFLEQCTQRIKPNGYLVLNCWKEHSQNREL 184

Query: 186 GAALLRGLYHRHYWELPVKEGNVILIVPADLDQELDMQGLVARAEGLAPRLGYSLQSLIK 245
            A L +   H  +    +  G   +I  + + Q L    L  +A+ L+ +L +SL+  + 
Sbjct: 185 LADLQQ---HFAHVNACLTSGGNWVIFASQIPQSLGASALKNQAQALSQQLDFSLERSLT 241

Query: 246 AIRP 249
              P
Sbjct: 242 RFGP 245