Pairwise Alignments

Query, 402 a.a., Ammonium transporter from Pseudomonas fluorescens FW300-N2E2

Subject, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  179 bits (455), Expect = 1e-49
 Identities = 136/405 (33%), Positives = 205/405 (50%), Gaps = 36/405 (8%)

Query: 8   VDGLVHSSNTLFILLGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAVSTLAYFF 67
           V  L  + +T + L+   +V+ M AGFA LE G VR KN    L+K +  +A++ + Y  
Sbjct: 3   VSELRFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLL 62

Query: 68  IGYWIAYG--------VTFLQPAAVLSADHGYSLVK-FFFLLTFAAAIPAIISGGIAERA 118
           +GY I Y          +F       +AD  ++L   FFF + F A   +I+SG +AER 
Sbjct: 63  VGYNIMYVDNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERM 122

Query: 119 RFAPQLCATVLIVAFVYPFFEGMIWNGNFGLQAWLQARFGASFHDFAGSVVVHAMGGWLA 178
           +    L  +V++   +YP  EG  W    G  A L       F DFAGS +VH  G   A
Sbjct: 123 KLWAFLVFSVVMTGIIYP-VEG-YWTWGKGFIASL------GFVDFAGSGIVHMTGAAAA 174

Query: 179 LAAVLLLGPRNGRY-RDGRLVAFAPSSIPFLALGSWILIVGWFGFN-----VMSAQTLPG 232
           +A VLLLG R G+Y  +G++     S++P   LG +IL +GWFGFN     ++S      
Sbjct: 175 IAGVLLLGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANAS 234

Query: 233 VSGLVAVNSLMAMVGGTVAALIV-----GRNDPGFLHNGPLAGLVAVCAGSDLMHPVGAL 287
               V VN+  A   G ++ALIV     G+ D   + NG LAGLVA+ A       + A 
Sbjct: 235 AVAKVFVNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAG 294

Query: 288 VTGAIAGALFVWCFTAAQGKWKIDDVLGVWPLHGLCGVWGGIACGVFGQSALGGLGGVSL 347
           V G +AG L V+       + KIDD +G   +HG+ G  G +   +   +A       ++
Sbjct: 295 VIGLVAGGLVVFSIVGLD-RIKIDDPVGAISVHGVAGFLGLMCVPLSNANA-------TI 346

Query: 348 VSQLIGTALGVVVALAGGFAVYGMVRVVLGLRLTQEEEYYGADLS 392
            +QL G A+      +  FAV+ ++++ +G+R+++EEEY G D S
Sbjct: 347 TAQLTGAAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDAS 391