Pairwise Alignments

Query, 296 a.a., Similar to ribosomal large subunit pseudouridine synthase A from Pseudomonas fluorescens FW300-N2E2

Subject, 350 a.a., Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) from Acidovorax sp. GW101-3H11

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 29/246 (11%)

Query: 60  QVDLPYREGLRIHYFREVPDEKPIPVVESILYADEHLVVADKPHFLPVTPAGEYVEQTLL 119
           Q+ L  R  L+   FR      P P+   ++Y DEHL+V +KP  L V PA      TLL
Sbjct: 101 QLALEMRPTLQSQAFR------PEPMAIDVVYEDEHLLVVNKPAGLVVHPAPGNWSGTLL 154

Query: 120 RRLIRRLDNPHLVP----LHRIDRHTAGLVLFSANPHTRSVYQSLFPTRQIEKRYQAIAR 175
             L+ R +   LVP    +HR+D+ T+GL++ + N  T     +L   R+++++Y A+A+
Sbjct: 155 NGLLARDERALLVPRAGIVHRLDKDTSGLMVVARNRATMDALVALIAERKVKRQYLALAQ 214

Query: 176 ALPGLTFPRVHRSRMIDG----EPFFRMQEGPGE------PNTETAIEVLERNGELWRYG 225
                T P   +SR +D     +P  R++    +       +  T +  L+   +     
Sbjct: 215 G--AWTGP---KSRSVDAPIGRDPRNRLRMAVVDLALHAGKSARTDVLCLDGTDQGCWVQ 269

Query: 226 LYPVTGKKHQLRVHMNALGAGICNDPFYPDVLRDAEDDYANPLKLLAQGLRFIDPITGQE 285
               TG+ HQ+RVHM +L   +  D  Y      A    A    L A  L F+ P+TG+ 
Sbjct: 270 CTLHTGRTHQIRVHMASLKHPLVGDTLYGGAPLGAMQRQA----LHAYRLAFVHPVTGKA 325

Query: 286 RVFQSE 291
             FQ++
Sbjct: 326 LEFQAQ 331