Pairwise Alignments

Query, 296 a.a., Similar to ribosomal large subunit pseudouridine synthase A from Pseudomonas fluorescens FW300-N2E2

Subject, 244 a.a., tRNA pseudouridine(65) synthase TruC from Vibrio cholerae E7946 ATCC 55056

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 30/231 (12%)

Query: 89  ILYADEHLVVADKPHFLPVTPAG------EYVEQTLLRRLIRRLDNPHLVPLHRIDRHTA 142
           I+Y DE+LV  +KP  + V  +       E+V QTL  ++       H+ PLHR+DR T+
Sbjct: 4   IVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQI-----GQHVFPLHRLDRPTS 58

Query: 143 GLVLFSANPHTRSVYQSLFPTRQIEKRYQAIARA----LPGLTFPRVHRSRMIDGEPFFR 198
           G+++F+ +    S    +F   ++EK Y AI R        L +P       I  +  F 
Sbjct: 59  GVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADK--FA 116

Query: 199 MQEGPGE-------PNTETAIEVLERNGELWRYGL---YPVTGKKHQLRVHMNALGAGIC 248
            Q+   +       P  +  + +        RY L    P TG+KHQLR HM  L   I 
Sbjct: 117 KQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIV 176

Query: 249 NDPFYPDVLRD---AEDDYANPLKLLAQGLRFIDPITGQERVFQSEIILQW 296
            D  + D + +    E   A  L L A  LRF+ P T Q  V ++ +   W
Sbjct: 177 GDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVW 227