Pairwise Alignments

Query, 296 a.a., Similar to ribosomal large subunit pseudouridine synthase A from Pseudomonas fluorescens FW300-N2E2

Subject, 300 a.a., pseudouridine synthase from Pseudomonas aeruginosa PA14

 Score =  391 bits (1004), Expect = e-113
 Identities = 194/298 (65%), Positives = 225/298 (75%), Gaps = 2/298 (0%)

Query: 1   MSGSSFSAAHHQASTLYLPPGSWQTVLECLCEHFSAISREQWLDRIARGRVLDGEGKAIQ 60
           MS  S   A  +ASTL+LP G W TVL+CLC  F AI R+ WL R+ RGRVLD EG+A+ 
Sbjct: 1   MSSPSLPDASLRASTLHLPAGPWSTVLDCLCARFPAIDRDTWLARMQRGRVLDAEGRALG 60

Query: 61  VDLPYREGLRIHYFREVPDEKPIPVVESILYADEHLVVADKPHFLPVTPAGEYVEQTLLR 120
               YREGLR+HYFRE+P E PIP    ILY DEHL+VADKPHFLPV PAG YVEQTLL 
Sbjct: 61  PQAAYREGLRVHYFRELPAEAPIPFEARILYRDEHLLVADKPHFLPVMPAGGYVEQTLLA 120

Query: 121 RLIRRLDNPHLVPLHRIDRHTAGLVLFSANPHTRSVYQSLFPTRQIEKRYQAIARALPGL 180
           RL R   N  LVPLHRIDRHTAGLVLFS NP +R  YQ+LF  R+I+K Y+AIA ALP L
Sbjct: 121 RLARSTGNRDLVPLHRIDRHTAGLVLFSTNPGSRGRYQALFRERRIDKYYEAIAPALPRL 180

Query: 181 TFPRVHRSRMIDGEPFFRMQEGPGEPNTETAIEVLERNGELWRYGLYPVTGKKHQLRVHM 240
            FP + R+R++ GEPFFRM+EG GEPN+ET IEV ERNG  WRY LYPVTGKKHQLRVH+
Sbjct: 181 DFPLLRRTRLVPGEPFFRMREGEGEPNSETRIEVAERNGRWWRYRLYPVTGKKHQLRVHL 240

Query: 241 NALGAGICNDPFYPDVL--RDAEDDYANPLKLLAQGLRFIDPITGQERVFQSEIILQW 296
            ALGAGI ND FYP++L   D+ DDY  PLKLLA+GLRF DP++G+ R F+S + L W
Sbjct: 241 AALGAGIQNDGFYPELLDAEDSPDDYRRPLKLLARGLRFDDPLSGERRTFESGLRLDW 298