Pairwise Alignments

Query, 416 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella loihica PV-4

 Score =  277 bits (709), Expect = 4e-79
 Identities = 169/418 (40%), Positives = 239/418 (57%), Gaps = 8/418 (1%)

Query: 1   LRLSGPLIEAALPGVVVGEVCEVRRHWRSPEVAARAQVIGFKPGAVLLSLLGDGRGLSRE 60
           +R+ G  +EA      VG +C +     +      A+VIGF    + L  + +  G+   
Sbjct: 31  VRVVGLTLEATGCKAPVGSLCSIA----TMAGDLIAEVIGFDDKLLYLMPIEELSGVMPG 86

Query: 61  SMIVPTGSTLQLACSDALLGSVVDPQGRIVERLAPSTAVAQRDCPVDADPPPYQQRRPVA 120
           + + P G    L     LLG V+D  G  ++ L       +         P    RR ++
Sbjct: 87  AKVTPLGEQTGLNVGMGLLGRVLDGNGAPIDGLGQLHTDQKATRHATMLNP--LARRAIS 144

Query: 121 EPLRTGIRVIDGLLTCGVGQRIGIFAAAGSGKTTLINMLIEHTDAEVFVIGLIGERGREV 180
           EPL  G+R I+ +LT G GQR+G+FA +G GK+ L+ M+   T A+V V+GL+GERGREV
Sbjct: 145 EPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTTADVIVVGLVGERGREV 204

Query: 181 TEFIAHLRQSPKHSRCVVVFATSDFSSVDRCNSALQATTIAEYFRDQGWRVVLLLDSLTR 240
            EFI  +  +   SR VVV A +D S + R  +   +T IAEYFRD G+ V+LL+DSLTR
Sbjct: 205 KEFIEEILGAEGRSRSVVVAAPADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTR 264

Query: 241 YARARRDLALAAGEAPARRGYPASVFDALPRLLERP--GVTATGSITAWYTVLLESDDEP 298
           YA+A+R++ALA GE PA +GYP SVF  LP+L+ER   G    GSITA+YTVL E DD  
Sbjct: 265 YAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGAGQGSITAFYTVLTEGDDLQ 324

Query: 299 DPIAEEIRSILDGHVYLSRALAAKGHYPAIDVLRSVSRVATQVTTPQVQQLAASTRETLA 358
           DPIA+  R+ILDGH+ LSRALA  GHYPAIDV  S+SRVA  V +    +     ++  +
Sbjct: 325 DPIADAARAILDGHIVLSRALADSGHYPAIDVEASISRVAPMVISDAHLEATRRVKQMYS 384

Query: 359 RLEQLQVFLDMGEYSPGVDAANDRAMHRRDALDRWLRQPTGECCEPDETLRSLHEILA 416
             +Q +  + +G Y+ G D   D A+  + A++ +LRQ   E    D +   L ++ A
Sbjct: 385 LYQQNRDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMKEAISFDSSALMLGQLSA 442