Pairwise Alignments

Query, 416 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

Subject, 445 a.a., flagellum-specific ATP synthase FliI (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  284 bits (726), Expect = 4e-81
 Identities = 166/398 (41%), Positives = 240/398 (60%), Gaps = 8/398 (2%)

Query: 1   LRLSGPLIEAALPGVVVGEVCEVRRHWRSPEVAARAQVIGFKPGAVLLSLLGDGRGLSRE 60
           +R+ G  +EA+     VG +C +     +      A+V+GF    + L  + + RG+   
Sbjct: 31  VRVVGLTLEASGCRAPVGSLCSIE----TMVGELIAEVVGFDDELLYLMPIEELRGVLPG 86

Query: 61  SMIVPTGSTLQLACSDALLGSVVDPQGRIVERLAPSTAVAQRDCPVDADPPPYQQRRPVA 120
           + +VP G    L    +LLG V+D  G  ++ L   +   Q     +A  P    RR + 
Sbjct: 87  ARVVPLGEQAGLNVGLSLLGRVLDGNGVPLDGLGALSTEQQAPRHSNAINP--LSRRAIT 144

Query: 121 EPLRTGIRVIDGLLTCGVGQRIGIFAAAGSGKTTLINMLIEHTDAEVFVIGLIGERGREV 180
           EPL  G+R I+ +LT G GQR+G+FA +G GK+ L+ M+   T A++ V+GL+GERGREV
Sbjct: 145 EPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREV 204

Query: 181 TEFIAHLRQSPKHSRCVVVFATSDFSSVDRCNSALQATTIAEYFRDQGWRVVLLLDSLTR 240
            EFI  +      +R VVV A +D S + R  +   +T IAEYFRD G+ V+LL+DSLTR
Sbjct: 205 KEFIEEILGEKGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTR 264

Query: 241 YARARRDLALAAGEAPARRGYPASVFDALPRLLERP--GVTATGSITAWYTVLLESDDEP 298
           YA+A+R++ALA GE PA +GYP SVF  LPRL+ER   G    GSITA+YTVL E DD+ 
Sbjct: 265 YAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEGDDQQ 324

Query: 299 DPIAEEIRSILDGHVYLSRALAAKGHYPAIDVLRSVSRVATQVTTPQVQQLAASTRETLA 358
           DPIA+  R+ILDGH+ LSR+LA  GHYPAID+  S+SRVA  V + +  +     ++T +
Sbjct: 325 DPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQTYS 384

Query: 359 RLEQLQVFLDMGEYSPGVDAANDRAMHRRDALDRWLRQ 396
             +Q +  + +G Y+ G D   D A+  + A++ +LRQ
Sbjct: 385 LYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAFLRQ 422