Pairwise Alignments

Query, 239 a.a., Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) from Pseudomonas fluorescens FW300-N2E2

Subject, 271 a.a., type III secretion lipoprotein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 91.3 bits (225), Expect = 2e-23
 Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 4/179 (2%)

Query: 9   LLGLALAGCRQPSLLEGLDQQQANEVLSVLQRNNIAAVKVDAGKAGYAVKIDQSDFSAAV 68
           LL + L GC+   L +GL+++QAN +L+ L +  I   K   GK GY + +++     A+
Sbjct: 22  LLLVLLTGCKA-ELYKGLNEEQANTMLATLLKRGIEVDKQSEGKNGYTLSVERRQVVQAL 80

Query: 69  DLLNLYSLPSRPRLQVAEMFPADSLVASPRAEKARLYSALEQRIEQSLAVLEGVVSARVH 128
           ++L   SLP      + ++F  D ++ASP  EKARL  A+ Q +  + + ++GV++AR H
Sbjct: 81  EVLRENSLPREQYQSLGKVFSGDGMIASPSEEKARLSYAISQELADTFSRIDGVLTARAH 140

Query: 129 VSY-DLDAGEGGRKSPPIHLSAVVLHERDVEPQLLITDIKRFLKNSFAAVEYENVSVVL 186
           V     D G   R   P   +  + H  D     LI  I+     +   ++YE VSV+L
Sbjct: 141 VVLASSDVGTDTR--TPASAAVFLRHTEDSPVVNLIPKIREMTAKAVPGLDYEKVSVML 197