Pairwise Alignments

Query, 471 a.a., Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation from Pseudomonas fluorescens FW300-N2E2

Subject, 480 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  395 bits (1014), Expect = e-114
 Identities = 194/412 (47%), Positives = 262/412 (63%), Gaps = 7/412 (1%)

Query: 22  DLYASREKIYTRAFTGLFRNLRMAGGALLFLLYFGTVWLNWGGHQAVWWNLPERKFFIFG 81
           +L   R KI+ +   G F+ LR    +LL L +F   ++ + G QA+  ++  ++F  F 
Sbjct: 26  NLPVQRGKIHIKEQKGRFQRLRTGLNSLLILFFFLLPFIPYQGRQAILLDVERQEFHFFN 85

Query: 82  ATFWPQDFILLSGMLIIAAFGLFFITVYAGRVWCGYTCPQSVWTWIFMWCEKVTEGDRNQ 141
            T WPQDF LL+ + IIAAF LFF+TV+ GRVWCGY CPQ+ W++ F+W E+  EG+ N+
Sbjct: 86  LTLWPQDFTLLAWLFIIAAFALFFVTVFWGRVWCGYLCPQTSWSFAFVWIERQIEGNSNK 145

Query: 142 RIKLDKAPMGANKFLRKLAKHSLWLLIGFVTGMTFVGYFTPIRELVFEFFTGQADGWSYF 201
           R  LDKAP    K L++ AKH  W L G +TG  F+ YF P  EL  + FT  A  W   
Sbjct: 146 RHALDKAPWSLEKVLKRGAKHLAWALAGLITGCGFIAYFIPASELYPQIFTLSASFWVTA 205

Query: 202 WVGFFTLATYGNAGWLREQVCIYMCPYARFQSVMFDKDTLIVSYDPRRGESRGPRKKGVD 261
           WV FF L TY NAGW+REQ+C++ CPYARFQS MFD +TL VSYD  RGESRGPRK+   
Sbjct: 206 WVWFFALCTYLNAGWMREQMCLHCCPYARFQSAMFDANTLTVSYDAARGESRGPRKR--- 262

Query: 262 YKALGLGDCIDCTMCVQVCPTGIDIRDGLQIECIGCAACIDACDNIMDKMDYPRGLISYT 321
            +A  LGDC+DC +CV VCPTGIDIR+GLQ ECI C AC+DACD  MDK  Y +GLI Y 
Sbjct: 263 KQATDLGDCVDCNLCVDVCPTGIDIRNGLQYECINCGACVDACDQTMDKFGYDKGLIRYA 322

Query: 322 TEHNLSGQKTHKLRP-RLIGYALVLLAMISLLVTAFFMRSLVGFDVSKDR-VLYRENAEG 379
           +E+ L  ++  +    + +GY + ++ M+S+     +    +  +V +DR  LYRE  +G
Sbjct: 323 SENELQKKEVKRFTSFKFVGYGIAVIIMLSVFALDLYRHQSIDLNVIRDRQSLYREVGDG 382

Query: 380 RIENVYSLKIMNKDQRDHTYV--LEAAGLPDLKLQGRREIKVAAGEIYSQPV 429
           RIEN Y+LKI NK Q+DH Y+  L+  G      +  +++ + AGE  S PV
Sbjct: 383 RIENSYTLKIRNKTQQDHQYLISLKDTGNHGFAKETSQQVLIKAGEQLSYPV 434