Pairwise Alignments

Query, 471 a.a., Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation from Pseudomonas fluorescens FW300-N2E2

Subject, 475 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  509 bits (1311), Expect = e-149
 Identities = 246/469 (52%), Positives = 318/469 (67%), Gaps = 8/469 (1%)

Query: 2   SNQIPVHDVTPPAKDANKSVDLYASREKIYTRAFTGLFRNLRMAGGALLFLLYFGTVWLN 61
           +N+I +H       DA+K+ D +  R +IY RA  GL+ +LR   G +  L +    W+ 
Sbjct: 13  TNRIKIHQ-----PDADKA-DRFNPRNRIYVRAIDGLWSSLRRRMGWVAMLFFLILPWIP 66

Query: 62  WGGHQAVWWNLPERKFFIFGATFWPQDFILLSGMLIIAAFGLFFITVYAGRVWCGYTCPQ 121
           WG  QAVW+NL E+KF +FG T WPQD  LL+ + +IAAF LFF+T Y GRVWCGYTCPQ
Sbjct: 67  WGDRQAVWFNLGEQKFHVFGLTIWPQDLTLLAALFMIAAFALFFVTTYLGRVWCGYTCPQ 126

Query: 122 SVWTWIFMWCEKVTEGDRNQRIKLDKAPMGANKFLRKLAKHSLWLLIGFVTGMTFVGYFT 181
           +VWT++F+W E+  EG RN+RIKLD+ P   +K  RK AKH+ W+++  +T MTFV YF 
Sbjct: 127 TVWTFMFIWFEEKLEGARNKRIKLDQMPWSFDKIWRKTAKHTAWIVLSLLTAMTFVSYFV 186

Query: 182 PIRELVFEFFTGQADGWSYFWVGFFTLATYGNAGWLREQVCIYMCPYARFQSVMFDKDTL 241
           P RE+  + FT  A G  YFWV FFTLATYGNAGW+RE +CI+MCPYARFQS MFDK+T 
Sbjct: 187 PNREVYVDVFTLNASGGIYFWVVFFTLATYGNAGWMREIMCIHMCPYARFQSAMFDKNTF 246

Query: 242 IVSYDPRRGESRGPRKKGVDYKALGLGDCIDCTMCVQVCPTGIDIRDGLQIECIGCAACI 301
           IV YD +RGE+RGPR +  D K +GLGDCIDC +CVQVCPTGIDIR+GLQ ECI C ACI
Sbjct: 247 IVGYDAKRGETRGPRSRKADPKEMGLGDCIDCDLCVQVCPTGIDIRNGLQYECINCGACI 306

Query: 302 DACDNIMDKMDYPRGLISYTTEHNLSGQKTHKLRPRLIGYALVLLAMISLLVTAFFMRSL 361
           DACD  M++M YP GLISYTTE+ L G K   LRP+L+GY +VL  MI + + A    + 
Sbjct: 307 DACDQTMERMGYPLGLISYTTENKLEGVKEKVLRPKLVGYGVVLAVMILIFIYASATIAP 366

Query: 362 VGFDVSKDR-VLYRENAEGRIENVYSLKIMNKDQRDHTYVLEAAGLPDLKLQGRREIKVA 420
           V  D+ +DR  LYREN +G IEN ++LKI+NK ++ H Y +   GL + K  G   + +A
Sbjct: 367 VRMDIIRDRNQLYRENNQGLIENTFTLKILNKTEQAHEYTMSVEGLNNYKWYGPTSVTIA 426

Query: 421 AGEIYSQPVELSSAPEQLPSSTNEVTFILK-DADDESVHVEAKSRFIGP 468
            GE+ + PV +   P +L SS   +   +K   D E V VE +SRF  P
Sbjct: 427 GGEVLTLPVSVGVDPVELSSSVTNIEIKVKTHIDGEEVEVEQESRFFSP 475