Pairwise Alignments

Query, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 326 a.a., cytochrome-c oxidase, cbb3-type subunit III from Vibrio cholerae E7946 ATCC 55056

 Score =  263 bits (671), Expect = 6e-75
 Identities = 146/332 (43%), Positives = 199/332 (59%), Gaps = 21/332 (6%)

Query: 1   MTTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRAEQTDETVGHSFDGIEEYDNPLPKWWFM 60
           MTTFWSL++ V+++GT+     LL+   K +   +    +GH +DGI E +NPLPKWW  
Sbjct: 1   MTTFWSLWIIVITVGTLLGCAILLVWCLKDKMGVEEGVDMGHEYDGIRELNNPLPKWWTY 60

Query: 61  LFVGTIVFALGYLVLYPGLGNWKGLLPGYNYLDT------EKQTAFANGQTGWTGVHEWE 114
           LF+GT +FA  YL LYPGLG++KG+L G+   D       E + + A  Q     V ++ 
Sbjct: 61  LFIGTFIFAAIYLTLYPGLGSFKGIL-GWQSSDQTVRSLEESRASIAAAQQNKQLV-QYS 118

Query: 115 KEMARSDAKFGPIFAKFASMP-------IEEVAKDPQALKMGGRLFASNCSVCHGSDAKG 167
           KE+  ++A +G  F + A          I ++A D  ALK+G RLF  NCS CHGSDA+G
Sbjct: 119 KELDDAEAYYGEAFKRLAYQDGTTNLREIPDIAADSDALKVGQRLFLQNCSQCHGSDARG 178

Query: 168 AYGFPNLTDADWRWGGEPETIKTTIMGGRHAVMPGWAAVVGEQGVADVAAYLVTSLHSRK 227
             GFPNLTD  W +GGEP+ I TTI  GR   MP W  ++GEQGV +V +Y + SL  R 
Sbjct: 179 QKGFPNLTDDAWLYGGEPQAIVTTIRHGRIGQMPAWKDILGEQGVKEVVSYTL-SLSGRS 237

Query: 228 LPEGAKADPANGQKLFAANCVACHGPAGKGTPAMGAPDLTHPAGFIYGSSFAQLQQTIRY 287
           +     A  A   K   A C ACHG  GKG PA GAP+LT    +++G S A++ +T+  
Sbjct: 238 V----NAKEAEAGKARFAVCSACHGTDGKGNPAFGAPNLT-DNDWLFGDSRAEVTETVMN 292

Query: 288 GRQGQMPAQADLQGNDKVHLLAAYVYSLSHGE 319
           GR G MPA  +  G +K+ L+AAYV+SLS+ E
Sbjct: 293 GRSGVMPAWINTLGEEKIQLVAAYVWSLSNSE 324