Pairwise Alignments

Query, 444 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Pseudomonas fluorescens FW300-N2E2

Subject, 462 a.a., NorM family multidrug efflux MATE transporter from Pseudomonas sp. BP01

 Score =  247 bits (630), Expect = 6e-70
 Identities = 154/446 (34%), Positives = 224/446 (50%), Gaps = 13/446 (2%)

Query: 1   LLALALPIMVAQLATTAMGFVDAVMAGRVGPRDLAAVALGNSIWVPVFLLMTGTLLATTP 60
           LL LA P++ +QLA   M   D +M  R+ P+ LA   LG + +  V +   G + A   
Sbjct: 12  LLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIAAVGT 71

Query: 61  KVAQRFGAGTFAEIGPLVRQALWLALVVGLIASLALFSAEPILHIMNVDPELIGPCMEYL 120
            VA R GA        L +  LWLA  + L+A+LAL++ EP+L +    PE +    E+L
Sbjct: 72  LVAIRKGANDIEGATRLAQNGLWLAWGLSLVAALALWNLEPVLLLFGQQPENVASAAEFL 131

Query: 121 RGIGTGLPAVALYHVLRCFSDGLGRTRPAMVLGLCGLALNIPLNYIFIYGHLGVPAMGGV 180
             +   LP+   +  LR F+  LGR+ P MV+ + G  LN   N   I G  G+P +G +
Sbjct: 132 TLLPLALPSYLTFMALRGFTSALGRSTPVMVISVVGTVLNYLFNVALIEGMFGLPKLGLM 191

Query: 181 GCGWATAIVMWVMALGMAGWARWAPAYQSSRLFSRFDWPQWAVIKRLLGIGLPIGIAVFA 240
           G G  TA+V   MA+ +A + RW  AY +  L      P    ++ L  +GLPIG     
Sbjct: 192 GIGLVTAVVSLGMAIALALYIRWHSAYAAYPLRKGLSRPSLPALRELWRLGLPIGGTYMV 251

Query: 241 ESSIFAVIALLIGSLGATVVAGHQIALNFSSLVFMIPYSLGMAVTVRVGQALGRAQPREA 300
           E  +FA  AL +G LG+T +A HQIAL   S  FM+P  L  AVT+RVG   G      A
Sbjct: 252 EVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAGNLLAA 311

Query: 301 RFAAGVGMGTALAYACLSASLMFALRGPIAAIY-----TADPVVIEVASMLIVYAALFQF 355
           R A  VG+G         A+L   L   +  ++      A   + +VA  L++ AA F+ 
Sbjct: 312 RSAGRVGIGFGAMIMFAFAALFLLLPEALVGLFIDRNDPAFAAIFQVAVQLLMVAAWFEL 371

Query: 356 SDAIQVTAAGALRGYQDTRVTMILTLFAYWGIGLPVGYALGLTDWLGAASGPSGLWQGLI 415
            D +Q  A G++RG +D + T ++ L  YW +G P  +    T       G  G+W GL 
Sbjct: 372 FDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFT----LGGGAVGIWWGLA 427

Query: 416 VGLSCAALMLSI----RLARSARKQI 437
           +GL+CAA+ L+     R+ R  RK +
Sbjct: 428 LGLACAAVALTFGFEWRMKRLLRKAV 453