Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 605 a.a., lipid A export permease/ATP-binding protein MsbA from Pseudomonas stutzeri RCH2

 Score =  310 bits (794), Expect = 1e-88
 Identities = 200/585 (34%), Positives = 325/585 (55%), Gaps = 27/585 (4%)

Query: 16  FIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVD------QGFMTRSPHL--------- 60
           ++ PY      +L+  ++ A     +G  ++  VD        F  + P+L         
Sbjct: 19  YVVPYWGLFTISLVGFLIFASTQPMLGYMLKFFVDGLNNPESSFFGQVPYLQEHSWLAEL 78

Query: 61  -LNQSIGLFMVLVVGL-AIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRS 118
            L Q++ L +V +  +  IG+F   + ++ +   +V D+R  +FN+++ L   +++++ S
Sbjct: 79  KLLQAVPLLIVFIALMQGIGSFLGNFFLAKVSLGLVHDLRLALFNNMLTLPNRYFDSHNS 138

Query: 119 SEIQSRLTADTTLLQSVIGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAP 178
             + SR+T + T++      ++ + +R  + V+     L   N KLT +++  LP++   
Sbjct: 139 GHLISRITYNVTMVTGAATDAIKVVVREGMTVIFLFATLLWMNWKLTLVMLAILPVIGFM 198

Query: 179 ILVFGRRVRSLSRQSQDRIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTA 238
           +    ++ R  S++ Q  + DV    SET+   + V+++  +  +  RF     +     
Sbjct: 199 VSSASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRSFGGEPYERNRFLTASSENTAKQ 258

Query: 239 RKRIAQRAWLITLVIVLVLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTL 298
            + +   A     + +++  A+ V++++  + ++ G  S G+L A++  + ++      L
Sbjct: 259 LRMVKTNAVYTPSLQLVIYSAMAVLMFL--VLLLRGDASAGDLVAYITLAGLLPKPIRQL 316

Query: 299 SEVIGELQRAAGAAERIAELLRSQNIIQPPASGLVTLP-ERVRGDLRLEGVRFSYPSRPD 357
           SEV   +Q+    AE I E L  +     P     TL  E V G L +  + F YP   D
Sbjct: 317 SEVSSTIQKGVAGAESIFEQLDEE-----PEIDQGTLEREAVSGHLEVRNLDFVYPGT-D 370

Query: 358 SYAVDGLDLTIKAGETLALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDL 417
              +  +  TI+ G+ +ALVG SG+GKST+ +L+ RFY    GQIL+D   +      +L
Sbjct: 371 KQVLRDISFTIEPGQMVALVGRSGSGKSTLANLIPRFYHHEAGQILLDGADVESYTLRNL 430

Query: 418 RRHFALVSQNPALFFGTVEENIRYGN-PGATSEQVREAAQIAHAHDFIEKMPGGYQTHLG 476
           RRH ALV+Q   LF  TV  NI YG+  GA  + +R AA+ A+A +FIE+MP GYQT +G
Sbjct: 431 RRHIALVTQQVTLFNDTVANNIAYGDLAGAPLDDIRRAARDAYADEFIEQMPEGYQTLVG 490

Query: 477 DGGQGLSGGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVI 536
           + G  LSGGQRQRLAIARALL ++P+L+LDEATSALD +SE  IQ AL ++M+ RTTLVI
Sbjct: 491 ENGVLLSGGQRQRLAIARALLKNSPVLILDEATSALDTESERHIQGALDHVMQGRTTLVI 550

Query: 537 AHRLATVKNADRIAVMDQGKVVAVGTHQELVASNALYARLAALQF 581
           AHRL+T++ AD+I VM+QG++V  GTH EL+A N  YARL A QF
Sbjct: 551 AHRLSTIEKADQILVMEQGRIVERGTHAELLAVNGAYARLHATQF 595