Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 593 a.a., ABC transporter, ATP-binding/permease protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  541 bits (1394), Expect = e-158
 Identities = 283/565 (50%), Positives = 399/565 (70%), Gaps = 2/565 (0%)

Query: 16  FIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLNQSIGLFMVLVVGL 75
           F+ PY+ +V  AL+ L++ +   L++GQG++L+VD+GF+      LNQ + L + +    
Sbjct: 26  FLRPYKLRVITALICLLIGSLAWLALGQGVKLIVDEGFVAGDAARLNQLVWLLVGIAAIS 85

Query: 76  AIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQSRLTADTTLLQSV 135
           +   F RFYL+SW+GERV  DIR +V+++L+ L P FY   R+ E+ SR TAD+TLLQ+V
Sbjct: 86  SSAVFCRFYLMSWLGERVSNDIRARVYDNLLTLPPAFYAKLRTGEVISRFTADSTLLQTV 145

Query: 136 IGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFGRRVRSLSRQSQD 195
           IGSS S+ LR+ + V+GGI ++ IT+ KLT++V++A+P VL PIL+FGR+VR+LSR SQD
Sbjct: 146 IGSSFSMALRSFVSVLGGIAMMAITSVKLTALVLVAVPAVLVPILIFGRKVRTLSRDSQD 205

Query: 196 RIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIAQRAWLITLVIVL 255
           R+AD+G+Y+ E+L +I TVQ+Y H+  D  +F+  + +   +A +RI  RA LI  V+ L
Sbjct: 206 RVADLGAYIDESLHEIHTVQSYTHEQVDRDKFAGLLGKVLGSAGRRIQFRALLIAGVMFL 265

Query: 256 VLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVIGELQRAAGAAERI 315
            + A+ +M+WVG  DV+ G IS GEL+AF+FY+L+V  A  T+SEVIG++QRA+GAAER+
Sbjct: 266 TIAAIALMIWVGARDVMIGAISAGELSAFLFYALLVAGATATISEVIGDVQRASGAAERL 325

Query: 316 AELLRSQNIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVDGLDLTIKAGETLA 375
            EL  + + + P A   V LP ++ GD+R+EG+ F YP   D  A+D + + I+ GE +A
Sbjct: 326 KELSEAVSEV-PQARHPVALPAKLSGDIRIEGLSFCYPG-TDVRALDEISVHIRPGEKVA 383

Query: 376 LVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFALVSQNPALFFGTV 435
           LVG SGAGKST++ LL RFY P  G I +DD  +   D   LRR FALV Q   +F  +V
Sbjct: 384 LVGESGAGKSTLFQLLGRFYAPDSGTIYLDDTDIANADLQALRRAFALVPQESVIFADSV 443

Query: 436 EENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGLSGGQRQRLAIARA 495
            EN+RYG   AT ++V+ A   A AHDFIE MP GY ++LG+ G  LSGGQ+QR+AIARA
Sbjct: 444 LENVRYGKVDATLDEVKAACVAARAHDFIEAMPEGYHSYLGERGVKLSGGQKQRIAIARA 503

Query: 496 LLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLATVKNADRIAVMDQG 555
           +L   P+LLLDEATSALDA SE  +++AL  L+  RT+L+IAHRLATV NADRI VMD+G
Sbjct: 504 ILASRPVLLLDEATSALDAVSERYVKEALDTLICGRTSLIIAHRLATVINADRILVMDKG 563

Query: 556 KVVAVGTHQELVASNALYARLAALQ 580
           K++A G+H EL+ S+  Y   A+LQ
Sbjct: 564 KIIAQGSHTELLESSQQYREFASLQ 588