Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 620 a.a., lipid ABC transporter ATPase/inner membrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  555 bits (1429), Expect = e-162
 Identities = 301/578 (52%), Positives = 408/578 (70%), Gaps = 13/578 (2%)

Query: 15  GFIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLNQSIGLFMVLVVG 74
           GF+ PYR +V  A++ L + +   LS+GQG+RL+VD+GF+  +   LN+ I L + +   
Sbjct: 38  GFLRPYRGKVIAAIVFLFIGSLAWLSLGQGVRLMVDEGFLRENGERLNEIILLVIGITAL 97

Query: 75  LAIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQSRLTADTTLLQS 134
            +   F RFYL++W+GERV ADIR +V++HL+ L PGFY   R+ E+ SR TAD TLLQS
Sbjct: 98  SSSAIFCRFYLMTWLGERVSADIRLKVYDHLLKLSPGFYARLRTGEVISRFTADATLLQS 157

Query: 135 VIGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFGRRVRSLSRQSQ 194
           V+GSSLS+ LR ++ VVGG+V++ IT+ KLT++V++A+PLVL PI  FGR+VR LSR+SQ
Sbjct: 158 VVGSSLSMALRASVTVVGGLVMMAITSLKLTALVLLAVPLVLGPIFFFGRKVRELSRKSQ 217

Query: 195 DRIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIAQRAWLITLVIV 254
           DR+ D+G+YV E+L +I TVQAY H+ +D Q FS  VE   + AR RI  RA LI+LV+ 
Sbjct: 218 DRVGDLGAYVDESLHEIHTVQAYCHEDRDRQLFSERVEAVMEAARGRIKYRAILISLVMF 277

Query: 255 LVLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVIGELQRAAGAAER 314
           L + A+ ++ WVG  DV++  I+ GEL+AF+FY+++V  A  T+SEVIGE+QRAAGA ER
Sbjct: 278 LSILAIALITWVGAKDVMSEAITPGELSAFMFYAVMVAGAVATISEVIGEIQRAAGATER 337

Query: 315 IAELLRSQNIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVD------------ 362
           + EL+ +  I  P A   V+LP +VRG+L LE VRFSYP +  + + +            
Sbjct: 338 LIELVETP-IDIPLAPKPVSLPAKVRGELSLEQVRFSYPVQASADSAEEMEAQAGVEVIR 396

Query: 363 GLDLTIKAGETLALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFA 422
           GL L I  GE +ALVG SGAGKST+++LL RFY    G I +D + +  L P DLR+ +A
Sbjct: 397 GLSLHIAPGERVALVGASGAGKSTLFELLQRFYVLDSGVIALDGIDIASLRPQDLRQQYA 456

Query: 423 LVSQNPALFFGTVEENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGL 482
           LV Q   +F  +V EN+RYG P A+ E+V+ A   A A +FI     GYQT+LG+ G  L
Sbjct: 457 LVPQESVIFATSVLENVRYGRPDASLEEVQAACVAARADEFIADFSEGYQTYLGERGVRL 516

Query: 483 SGGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLAT 542
           SGGQ+QR+AIARA+L D P+LLLDEATSALDA SE  ++QAL  LM+ RTTL+IAHRLAT
Sbjct: 517 SGGQKQRIAIARAILADRPVLLLDEATSALDAVSEQKVKQALDVLMQGRTTLIIAHRLAT 576

Query: 543 VKNADRIAVMDQGKVVAVGTHQELVASNALYARLAALQ 580
           V NADRI VMD+G+++A GTH EL+ SN+LY   A+LQ
Sbjct: 577 VLNADRILVMDKGELIASGTHGELMQSNSLYREFASLQ 614