Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 735 a.a., ABC-type multidrug transport system, ATPase and permease component from Dechlorosoma suillum PS

 Score =  322 bits (825), Expect = 3e-92
 Identities = 203/577 (35%), Positives = 330/577 (57%), Gaps = 23/577 (3%)

Query: 16  FIAPYRKQV-AGALLALIVTAG------ITLSMGQGIRLLVDQGFMTRSPHLLNQSIGLF 68
           F  PYR Q+ AG +L LI TA       +T+ +   + +    G    +  +     GL 
Sbjct: 155 FARPYRGQLLAGFILTLISTAATLVAPYMTMPLMDEVLIPYQNGQPLDTGKVYFYLGGLL 214

Query: 69  MVLVVGLAIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQSRLTAD 128
              ++   +G +A+ Y+++ + ER+ AD+R Q + HL+ L   ++   R+ ++ +R+ ++
Sbjct: 215 GSALLAWGLG-WAKTYILALVSERLGADLRSQTYEHLLKLSLEYFGGKRTGDLMARIGSE 273

Query: 129 TTLLQSVIGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFGRRVRS 188
           +  +   +   L  F  + LM+    V+L   NP L ++ +I LP ++  I V   ++R 
Sbjct: 274 SDRICVFLSLYLLDFFTDVLMITMTAVILVSINPWLAAVTLIPLPFIVWLIHVVRDKLRH 333

Query: 189 LSRQSQDRIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIAQRAWL 248
              Q     + V S +++T+  I+ V+A+  + ++  RF    ++  + A  R+  R W 
Sbjct: 334 GFEQIDRVWSGVTSVLADTIPGIRVVKAFAQEKRETSRFKDANQRNLE-ANDRV-NRLWS 391

Query: 249 ITLVIVLVLGAVGVML-WVGGMDVIA-GRISGGELAAFVFYSLIVGSAFGTLSEVIGELQ 306
           +    + +L  VG+++ W  G+ ++   +++ G LAAF+ Y     +   ++S ++   Q
Sbjct: 392 LFSPTITLLTEVGLLIVWGLGIWLVTKNQVTVGTLAAFLAYIGRFYTRLDSMSRIVSHTQ 451

Query: 307 RAAGAAERIAELLRSQNIIQPPASGLVTLPE---RVRGDLRLEGVRFSYPSRPDSYAVDG 363
           +AA  A+RI ++L   + +  P       P+   +V G + +E V F Y +R     + G
Sbjct: 452 KAASGAKRIFDILDHVSSVPEPVK-----PQHLTKVEGGITVERVGFRYGNRT---VLRG 503

Query: 364 LDLTIKAGETLALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFAL 423
           +DL I  GE + LVG SG+GKST+ +L+ RFYD  +G I ID V +  +   + R+H  L
Sbjct: 504 VDLKINPGEMIGLVGHSGSGKSTLVNLICRFYDVGEGAICIDGVDVRNIPVSEYRKHIGL 563

Query: 424 VSQNPALFFGTVEENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGLS 483
           V Q P LFFGT+ ENI YG P A+ E++  AA+ AHAH+FI ++P GY + +G+ GQ LS
Sbjct: 564 VLQEPFLFFGTIAENIAYGKPDASREEIVAAARAAHAHEFILRLPHGYDSLVGERGQALS 623

Query: 484 GGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLATV 543
           GG+RQR++IARALL+D  IL+LDEATSA+D ++E  IQ AL NL+K RTT+ IAHRL+T+
Sbjct: 624 GGERQRISIARALLIDPKILILDEATSAVDTETELEIQGALDNLIKGRTTIAIAHRLSTL 683

Query: 544 KNADRIAVMDQGKVVAVGTHQELVASNALYARLAALQ 580
           + ADR+ VMD+G VV  G H EL+A    Y RL   Q
Sbjct: 684 RKADRLVVMDRGVVVEEGQHDELIAKEGAYYRLYTAQ 720