Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 618 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  367 bits (941), Expect = e-105
 Identities = 214/569 (37%), Positives = 351/569 (61%), Gaps = 9/569 (1%)

Query: 16  FIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLNQSIGLFMVLVVGL 75
           +  PY+ Q+  ++LA+ V +  T      ++  +D+ F+ +    L     LF VL +  
Sbjct: 25  YFRPYKGQIFLSMLAMGVVSLSTAGSAWLVKPALDEIFINKDEQALLYVPLLFFVLTLVK 84

Query: 76  AIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQSRLTADTTLLQSV 135
             G + + Y + + G RV+  +R ++++ ++YL   FYE ++   + SR+  D T++++ 
Sbjct: 85  GAGRYVQNYFMQYSGLRVLEKLRSELYDKIIYLPLQFYEESQVGMLMSRIINDVTMIRNS 144

Query: 136 IGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFGRRVRSLSRQSQD 195
           +  S+ + +R  L ++G + ++F  NP+L    V+ LP  L P++ FGR++R   R++Q 
Sbjct: 145 L-PSIVMMVRQLLTMLGLVGVVFYQNPRLAVWAVLVLPAALYPLVWFGRKLRKYGRRNQS 203

Query: 196 RIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIAQRAWLITLVIVL 255
           ++AD+   + E    I+ V+A+  +  + +RF    E+      K+ +     ++  I+ 
Sbjct: 204 KLADISVVLQEVFSGIRVVKAFATERHEARRFDDENERLARLYLKQASVSE--LSSPIME 261

Query: 256 VLGAVGV--MLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVIGELQRAAGAAE 313
           ++GAVG+  ++W GG +VIAG  + G   +FV    ++     +L+    E+QRA   AE
Sbjct: 262 LIGAVGIGLVIWFGGHEVIAGETTAGTFFSFVAALAMMYDPVKSLNSYNMEVQRALAGAE 321

Query: 314 RIAELLRSQNIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVDGLDLTIKAGET 373
           R+ E+L +  +      G     E  R +LR +GV F+Y S+  + A+D + LT++AGE 
Sbjct: 322 RVFEILDAPELTVEQG-GDTPFDEPFR-ELRFDGVTFTYGSKT-APALDNVSLTVRAGER 378

Query: 374 LALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFALVSQNPALFFG 433
           +A+VGPSGAGKST  +L+ RFY+P QG I+++  P++      LRR+ ++VSQ+  LF  
Sbjct: 379 VAIVGPSGAGKSTFVNLIPRFYEPQQGAIILNGRPVSDYTLETLRRNVSMVSQDTFLFNL 438

Query: 434 TVEENIRYGNPGATSEQ-VREAAQIAHAHDFIEKMPGGYQTHLGDGGQGLSGGQRQRLAI 492
            V +NI YG  GA  E  VR AA  A+A +FI ++P GY T LG+ G  LSGGQ+QRL I
Sbjct: 439 PVRDNITYGLSGAIDEDTVRAAAMSAYADEFIRELPEGYDTLLGERGVKLSGGQKQRLTI 498

Query: 493 ARALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLATVKNADRIAVM 552
           ARA++ DAP+L+LDEATSALD+++E ++Q+AL NLM+NRT++VIAHRL+T+ +ADRI VM
Sbjct: 499 ARAIMKDAPLLILDEATSALDSEAERIVQKALDNLMENRTSIVIAHRLSTILSADRILVM 558

Query: 553 DQGKVVAVGTHQELVASNALYARLAALQF 581
           +QG++V  G H+EL+A   +YARL A+QF
Sbjct: 559 EQGRIVDAGRHEELLARCPMYARLYAMQF 587