Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 602 a.a., lipid A ABC exporter family, fused ATPase and inner membrane subunits (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  513 bits (1321), Expect = e-150
 Identities = 273/582 (46%), Positives = 389/582 (66%), Gaps = 2/582 (0%)

Query: 4   SRHRRAIRLASGFIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLNQ 63
           S++  A++    +IAPYR  +  A + L++TA ++L +   +R +VD GF  R   LL+Q
Sbjct: 20  SKNIGALKTLFPYIAPYRTLLVSAGVVLVLTAFLSLLLPMAVRRVVD-GFDARDTALLDQ 78

Query: 64  SIGLFMVLVVGLAIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQS 123
             G  + +   LA+GT  R+YLV+ +GERVVADIR+ VF+  + + P F+E   + E+ S
Sbjct: 79  YFGAAIAVAALLALGTGLRYYLVTRLGERVVADIRKSVFDRTLGMSPAFFEKIMTGEVLS 138

Query: 124 RLTADTTLLQSVIGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFG 183
           RLT DTTL+ SVI SS+S+ LRN L+++GG++L+ +T+ KLT +V++ +PLVL PI+V G
Sbjct: 139 RLTTDTTLILSVISSSVSIALRNFLILIGGMILMLLTSGKLTGLVLLLVPLVLVPIVVLG 198

Query: 184 RRVRSLSRQSQDRIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIA 243
           R++R LSR +QD IA      SE L  ++TVQA+ H  +    F    E +FD+A++RI 
Sbjct: 199 RKLRKLSRINQDWIAASSGNASEALTSVQTVQAFTHVRESRAEFDRMTELSFDSAKQRIG 258

Query: 244 QRAWLITLVIVLVLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVIG 303
            RA +  +VI L+   +  +LW+G  DV    ++ GEL  FV Y+++V  + G LSE+ G
Sbjct: 259 VRAAMTVIVIFLIFTGIVGVLWMGARDVRDALMTPGELVQFVIYAIMVAGSVGALSEIWG 318

Query: 304 ELQRAAGAAERIAELLRSQNIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVDG 363
           ELQRAAGA ER+ ELL  ++ ++ P +    +P    G +  E V F+YP+RP +  +D 
Sbjct: 319 ELQRAAGATERLVELLTMKDTVEDPENPR-PMPANCEGRITFEDVSFTYPARPGTPVLDE 377

Query: 364 LDLTIKAGETLALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFAL 423
           +   I+ GET+ALVGPSGAGKST+  LLLRF+DP +G+I +D + L      D RR  A 
Sbjct: 378 IAFDIRPGETVALVGPSGAGKSTILQLLLRFFDPDEGRIKLDGIDLRDARRDDFRRKIAF 437

Query: 424 VSQNPALFFGTVEENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGLS 483
           V Q+  +F  +  ENIR+G P AT  +V  AA+ A A +F+ ++P GY+T +G+ G  LS
Sbjct: 438 VPQDAVIFATSARENIRFGRPDATDAEVEAAAKAAAADEFLSRLPDGYETFVGERGVMLS 497

Query: 484 GGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLATV 543
           GGQ+QR+AIARA+L DAP+LLLDEATSALDA+SE  +Q A+  L + RTTL++AHRLATV
Sbjct: 498 GGQKQRIAIARAILRDAPVLLLDEATSALDAESEQAVQHAVEQLSEGRTTLIVAHRLATV 557

Query: 544 KNADRIAVMDQGKVVAVGTHQELVASNALYARLAALQFNVGL 585
           K ADRI V ++G++VA GTH  LVA   LYARLA LQF  GL
Sbjct: 558 KKADRILVFERGRIVAEGTHDALVAQGGLYARLARLQFTAGL 599