Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 617 a.a., multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein from Caulobacter crescentus NA1000

 Score =  494 bits (1272), Expect = e-144
 Identities = 264/570 (46%), Positives = 373/570 (65%), Gaps = 5/570 (0%)

Query: 16  FIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLNQS-IGLFMVLVVG 74
           F+  ++     A   L+ +   TL +    + ++D GF       +N + +GL  V +V 
Sbjct: 48  FVIAHKGDGLAAGFFLLFSTAATLGLTYAFKNVIDHGFSKGQDAAINSAFVGLGAVALV- 106

Query: 75  LAIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQSRLTADTTLLQS 134
           LA+ T  RF+ ++ +GERVVAD+RR+++ H + L   ++   R+ E+ SRLT D  L++ 
Sbjct: 107 LALATALRFFFITRLGERVVADLRRKLYGHTLSLDQPYFLKTRTGEVLSRLTTDVALVEQ 166

Query: 135 VIGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFGRRVRSLSRQSQ 194
           ++G+S+S+ LRN L ++GG+  + + +PKL   +V+ +P++LAP+ + GRRVR L+  +Q
Sbjct: 167 LVGASISIALRNILNLIGGLTAMAVVSPKLAGFIVLMVPVILAPMFLVGRRVRKLTVTAQ 226

Query: 195 DRIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIAQRAWLITLVIV 254
           DR AD   Y  E+L  ++TVQA+  +     RF   VE A+  + +RI  RA +  +VI 
Sbjct: 227 DRFADAVGYAGESLDALETVQAFGRESASSGRFGAAVEAAYKASVRRITTRATMTAMVIT 286

Query: 255 LVLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVIGELQRAAGAAER 314
           L  G + ++LW G   V+AG ++GG LA F   +++   + G L EV G++Q+A+GA +R
Sbjct: 287 LAFGGITLLLWTGARLVLAGEMTGGTLAQFAMLAVMAAGSIGALGEVWGDVQKASGAMDR 346

Query: 315 IAELLRSQ-NIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVDGLDLTIKAGET 373
           I+ELL ++ +I  PP     TLP   +G++  E V F+YP RPD  A++G DL +K GET
Sbjct: 347 ISELLNAKPDIAAPPQPK--TLPVPGQGEIAFENVVFAYPGRPDLPALNGFDLRVKPGET 404

Query: 374 LALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFALVSQNPALFFG 433
           +ALVGPSGAGKSTV  LLLRFYDP  G IL+D V L   +P ++R   ALV+Q+  LF G
Sbjct: 405 VALVGPSGAGKSTVLRLLLRFYDPQSGCILLDGVNLRDAEPAEVRARMALVAQDSPLFSG 464

Query: 434 TVEENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGLSGGQRQRLAIA 493
           +  +NIR+G P AT EQVR AA  A A  F+  +P G+ T +G+  + LSGGQRQRLAIA
Sbjct: 465 SAMDNIRFGRPDATDEQVRAAADAAQATGFLSALPEGFDTPVGERAKTLSGGQRQRLAIA 524

Query: 494 RALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLATVKNADRIAVMD 553
           RAL+ +APILLLDEATSALDA+SE L+QQAL   M+ RTTLVIAHRLATV  ADRI VM+
Sbjct: 525 RALVREAPILLLDEATSALDAESEQLVQQALATAMEGRTTLVIAHRLATVLKADRIVVME 584

Query: 554 QGKVVAVGTHQELVASNALYARLAALQFNV 583
           +G+VV  G H EL A   LYARLA LQF V
Sbjct: 585 EGRVVEQGAHAELFAKGGLYARLARLQFGV 614