Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 618 a.a., lipid ABC transporter ATPase/inner membrane protein (RefSeq) from Shewanella sp. ANA-3

 Score =  553 bits (1426), Expect = e-162
 Identities = 291/578 (50%), Positives = 404/578 (69%), Gaps = 2/578 (0%)

Query: 3   SSRHRRAIRLASGFIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLN 62
           S R R  +     F+ PYR +V  A++ L++ +   LS+GQG+RL+VD+GF+  +   LN
Sbjct: 32  SIRQRAVLPWIWQFLKPYRLRVVAAIVFLLIGSLAWLSLGQGVRLMVDEGFIKDNAQRLN 91

Query: 63  QSIGLFMVLVVGLAIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQ 122
           + I L +++        F RFYL++W+GERV ADIR  V+N L+ L P FY   R+ E+ 
Sbjct: 92  EIILLVLLITAVSGTAVFCRFYLMTWLGERVSADIRLTVYNQLLKLSPAFYAKVRTGEVI 151

Query: 123 SRLTADTTLLQSVIGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVF 182
           SR TAD+TLLQ+V+GSSLS+ LR+ + V+GG+ ++ IT+ K+T +V++A+PLVL P+  F
Sbjct: 152 SRFTADSTLLQTVVGSSLSMALRSGVTVIGGLAMMGITSVKMTLLVLLAVPLVLGPVGFF 211

Query: 183 GRRVRSLSRQSQDRIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRI 242
           GR+VR+L+R+SQDR+AD+G+YV ETL +I TVQAY H+ +D   F+  VE     A  RI
Sbjct: 212 GRKVRTLARESQDRVADLGAYVDETLHEIHTVQAYGHEDKDRSLFNGRVEDVMIAASGRI 271

Query: 243 AQRAWLITLVIVLVLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVI 302
             RA LI+ V+ L + A+  + WVG  DV++G+++GGEL+AF+FY+++V  A  T+SEV+
Sbjct: 272 RYRAMLISSVMFLSIAAIASVTWVGAHDVMSGKMTGGELSAFMFYAVMVAGAVATISEVV 331

Query: 303 GELQRAAGAAERIAELLRSQNIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVD 362
           GE+QRA+GAAER+ EL  ++  I  P     TLP +VRG+L+L+ + F YP +      D
Sbjct: 332 GEIQRASGAAERLIELAETEVDIPAPLEP-KTLPAKVRGELQLQQLNFHYPEQTQLVLRD 390

Query: 363 GLDLTIKAGETLALVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFA 422
            L+LTI AGE +ALVGPSGAGKST++ LL RFY P  G I +D + +  L P DLR  FA
Sbjct: 391 -LELTITAGERVALVGPSGAGKSTLFQLLQRFYVPSSGSIHLDGIDIAELSPKDLRAQFA 449

Query: 423 LVSQNPALFFGTVEENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGL 482
           LV Q+  +F  +V EN+RYG   A+ ++V +A   A AH+FI +   GYQT+LG+ G  L
Sbjct: 450 LVPQDSVIFATSVLENVRYGRVDASEQEVIDACIAARAHEFISEFSEGYQTYLGERGVRL 509

Query: 483 SGGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLAT 542
           SGGQ+QR+AIAR +L D PILLLDEATSALDA SE  ++ AL  LMK +TTL+IAHRLAT
Sbjct: 510 SGGQKQRIAIARVILADRPILLLDEATSALDALSEQKVKLALDELMKGKTTLIIAHRLAT 569

Query: 543 VKNADRIAVMDQGKVVAVGTHQELVASNALYARLAALQ 580
           V NADRI V D+G++VA G HQ L+ +NALY   A+LQ
Sbjct: 570 VINADRIIVFDKGRIVASGKHQTLIQTNALYREFASLQ 607