Pairwise Alignments

Query, 329 a.a., Thiamin biosynthesis lipoprotein ApbE from Pseudomonas fluorescens FW300-N2E2

Subject, 352 a.a., apbE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  193 bits (490), Expect = 6e-54
 Identities = 112/325 (34%), Positives = 179/325 (55%), Gaps = 7/325 (2%)

Query: 1   VVLAGVLSGCDNGDT--LERFDGPTMGSHYSIQYVRHSAGPTAKTVQVEVESILAEVDRQ 58
           + +  ++ GC    T  + + +G   G+ + I +   +     K V+  + +   E+D+ 
Sbjct: 16  ISICTMVIGCQPQPTPKMVKIEGEAQGTTWHISFWSPN-NINVKLVEDNINNRFDELDKN 74

Query: 59  LSTYRSDSDIERFNALPANSCQVMPGPLLELVGVGEQLSVQSDGSFDLTVEPLLNLWGFG 118
           LS YR DS I  FN+  +    V+   ++ELV   + +S +S G +DLTV+ L +LWGF 
Sbjct: 75  LSNYRPDSTISLFNSALSTEPIVVGEEIVELVAQAKIVSDKSLGCYDLTVKSLFDLWGFD 134

Query: 119 PQSREEKVPTAEALALVRQRVGHGHLRIESDRLCKDAA-VEVDFNSIAAGYAVDRIAARL 177
                   P+A A+A   +  G  H++I+S+ + KD A V VD +SIA GY+V  +A  L
Sbjct: 135 KYQLMN--PSAIAIAETLKDTGMQHIKIKSNSMAKDRAQVHVDLSSIAQGYSVGELAEIL 192

Query: 178 QALGIDSYLAEATGELKAVGRKPDGSAWRIALEEPRYDRQVAERVIEVN-GYGVSTSGDY 236
           +   I +YL E  GE+   G KP+G +W++A+E P  D+ +  +++ +     + TSG Y
Sbjct: 193 ERYNIKNYLVEIGGEMVVKGYKPNGESWKVAIERPLPDKNILHKLLMIKQDQAIMTSGTY 252

Query: 237 RKYFEQGGRRYSHTFDARTGAPVLHDLASVTVIHPSALMADGLSTLLLILGPERGWDYAE 296
           R YF+  G R SH  DARTG PV H+  SVTV+H + ++AD  ST LL LG E+G D A 
Sbjct: 253 RHYFDNNGVRLSHILDARTGYPVTHNTVSVTVLHKNPMLADAWSTALLCLGHEKGIDIAN 312

Query: 297 KHGIGVFFVLRDGNRFVSRTNDVFE 321
           ++ I   F+    N  +  + + F+
Sbjct: 313 ENSINALFITDKNNELIEYSTNGFD 337