Pairwise Alignments

Query, 329 a.a., Thiamin biosynthesis lipoprotein ApbE from Pseudomonas fluorescens FW300-N2E2

Subject, 275 a.a., apbE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 88  ELVGVGEQLSVQSDGSFDLTVEPLLNLWGFGPQSREEKVPTAEALALVRQRVGHGHLRIE 147
           +L+   +Q  V S+G FD++  PL+ +W F   +++  +P    +   R  VG   L   
Sbjct: 63  QLLSFAKQCFVLSNGLFDISACPLMQVWRF---TQDAILPAKVDIDAARALVGFERLEFN 119

Query: 148 SDRLCKDAAVEVDFNSIAAGYAVDRIAARL-QALGIDSYLAEATGELKAVGRKPDGSAWR 206
           S  L   A +++DF  IA  YAVD +A  L ++    S L    G++           W+
Sbjct: 120 SRELKIPAGMQLDFGGIAKEYAVDSVAYELAESYPKISVLVNFGGDIACP--VAHSVPWQ 177

Query: 207 IALEEP-RYDRQVAERVIEVNGYGVSTSGDYRKYFEQGGRRYSHTFDARTGAPVLHDLAS 265
           + +E+P R D   A +V+ +    ++TSGD R++ E  GRRY H  D RTG PV     S
Sbjct: 178 VGIEDPNRLDH--AAKVLAITQGALATSGDTRRFIEVDGRRYGHIVDPRTGYPVSRAPRS 235

Query: 266 VTVIHPSALMADGLSTLLLILGPE 289
           VTV+ P+ + A  L+T+ ++ G +
Sbjct: 236 VTVLGPNCVTAGMLATMAMLQGEQ 259