Pairwise Alignments

Query, 452 a.a., Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

 Score =  227 bits (579), Expect = 6e-64
 Identities = 156/481 (32%), Positives = 257/481 (53%), Gaps = 34/481 (7%)

Query: 2   RGRWSLSSRLALLFAACTAVVSLFAGVLFSRGSEAHFIELDQQLLEGKLIGLRRALQDLD 61
           R  +SLS RL    +  T +  +          E HF E D   L+     L R LQ  +
Sbjct: 7   RHPFSLSLRLTFFISLSTILAFIAFTWFMLHSVENHFAEQDVSDLQQISTTLNRILQSPE 66

Query: 62  A--EQTERRLEDELSRQADLALRIKGSDGVRWYDSSIRI---PA---------------- 100
              E+   ++++ ++   ++AL +    G   + S+      PA                
Sbjct: 67  DPDEKKVSKIKESIASYRNVALLLLNPRGEVLFSSAQGAALRPAVNSADFSEHSHARDVF 126

Query: 101 ----QLPEQPGLSTLSDADND-YRVLNAP---LYPNRANSPQLTLLLDITHHQHFLQRMQ 152
               + P +P + T S+   + YR++ +    ++  +  +  +   L I  H H+L  ++
Sbjct: 127 LWTVEDPARP-MDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSINFHLHYLDALK 185

Query: 153 R-LIWLTVGLSALATALLGAWAARRALRPLRRMGAIAGSVSARSLNARLPEEQMPAELAE 211
           + LI + V +S L   ++   A R+   PLR +     S+++ +L+ RL   ++P EL +
Sbjct: 186 KNLIAIAVVISLLIVLIIRI-AVRQGHLPLRNVSNAIKSITSENLDTRLEPTRVPIELEQ 244

Query: 212 LAHSINAMLGRLDDAFQRLSAFSADIAHELRTPLSNLLTHTQVTLTRERPLEDYREALHS 271
           L  S N M+G+++D F R + FSADIAHE+RTP++NL+T T++ L+++R  ++  + L+S
Sbjct: 245 LVISFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIALSQDRTQKELEDVLYS 304

Query: 272 NLEELQWMAQLVNDMLYLAKADHGLLALNREPLQLAEEVDVLLDFFAPLAEDTNVRLSRE 331
           +LEE   M ++V+DML+LA+AD+  L  +R    L  EV  + +FF   AE+ N+ L   
Sbjct: 305 SLEEYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFEFFEAWAEERNITLKFN 364

Query: 332 G-DGRIEGDRNMLRRALSNLLDNALRFTPADGEVRVHIVDATQGVSVSVENSGEGIAADL 390
           G    +EGD  M RRA++NLL NALR+TP    + V I +      + +EN G+ I  + 
Sbjct: 365 GMPCLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESFFDLVIENPGKPIPEEH 424

Query: 391 LPRLFDRFYRADPARQEGSSEHAGLGLAITRSIIRAHGGQIRCESADGWTRFLIELPKTS 450
           L RLFDRFYR DP+RQ    E +G+GLAI +SI+ AH G+++ ES    TRF++ +P+  
Sbjct: 425 LSRLFDRFYRVDPSRQR-KGEGSGIGLAIVKSIVEAHHGRVQVESDVRSTRFILSVPRLE 483

Query: 451 Q 451
           Q
Sbjct: 484 Q 484