Pairwise Alignments

Query, 294 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

Subject, 373 a.a., ABC-type uncharacterized transport system, permease component from Pseudomonas stutzeri RCH2

 Score =  266 bits (681), Expect = 4e-76
 Identities = 127/156 (81%), Positives = 141/156 (90%), Gaps = 1/156 (0%)

Query: 140 HDHDHDHD-HHHEHDHGHPEPKGLVLSLEGYQDAHEQAHANDIRKRFTNRQVTTGQIIVF 198
           H HD+D D H H+H H H + +GL LS+EGYQDAHE+AHANDIR RF NR VTTGQII+F
Sbjct: 218 HSHDYDLDFHEHDHGHDHSDLQGLELSVEGYQDAHERAHANDIRNRFNNRNVTTGQIILF 277

Query: 199 GLTGGLIPCPAAITVLLLCLQVKEVALGGLLVLCFSIGLAITLVTVGAAAAIGARQASNR 258
           GLTGGLIPCPAAITVLLLCLQVKEVALG +LVLCFS+GLA+TLV+VGAAAA+GARQASNR
Sbjct: 278 GLTGGLIPCPAAITVLLLCLQVKEVALGAVLVLCFSVGLALTLVSVGAAAAVGARQASNR 337

Query: 259 WPWLGTVARRAPYLSSVLIIGVGLYVGIHGWIGLNA 294
           WPWLG VARRAPYLSSVLIIGVG+YVG+HGWIGL A
Sbjct: 338 WPWLGAVARRAPYLSSVLIIGVGIYVGVHGWIGLTA 373



 Score =  237 bits (605), Expect = 3e-67
 Identities = 113/141 (80%), Positives = 126/141 (89%), Gaps = 1/141 (0%)

Query: 1   MPNFAELLQQGGTHAWLYFPSAILLGALHGLEPGHSKTMMAAFIVAIRGSVKQAVLLGLA 60
           M +FAELLQQG +HAWLYFPSAILLGALHGLEPGHSKTMMAAFIVAIRG+VKQA+LLGLA
Sbjct: 1   MSSFAELLQQGASHAWLYFPSAILLGALHGLEPGHSKTMMAAFIVAIRGTVKQAILLGLA 60

Query: 61  ATLSHTVVVWLVAIGGMYLGQGLDAETTEPYFQLASAALIVAIALWMLWRTWRGERMFRF 120
           AT+SHT VVWLVA+GGMYLGQ L+AETTEPYFQLASAA+I+ IALWMLWRTWRGE+M+RF
Sbjct: 61  ATISHTAVVWLVAMGGMYLGQNLNAETTEPYFQLASAAIIITIALWMLWRTWRGEQMWRF 120

Query: 121 QQG-HDHHHHHDHDHDHDHDH 140
           ++G H H HHHD     D  H
Sbjct: 121 EEGDHAHDHHHDETRRIDTGH 141