Pairwise Alignments

Query, 258 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

Subject, 298 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  282 bits (722), Expect = 5e-81
 Identities = 139/246 (56%), Positives = 188/246 (76%)

Query: 1   MIEPSIVLVAQGEKQVWIGGEAYGYDTGRFLMTSLDIPANSEVLQASPEQPCLGLVLRLD 60
           ++EPSI LV QG K + +G + + YD  RFL+TSLD+PA  +VL+AS E P LG+V++LD
Sbjct: 49  VVEPSIALVVQGAKAMTLGEQTFRYDPSRFLITSLDLPAKMQVLEASEEAPYLGVVIKLD 108

Query: 61  LRMVADLIAQGSLPPPRDRAVGIGAGIGTATPDLLAPFARLLGLLDEPDAIPILAPLIQR 120
           L +++DL+ Q  L   ++ A   G  +G  TP LL   +RL+ LLDEP++I +LAPLI+R
Sbjct: 109 LAVMSDLMLQTPLTMQKETASDQGMILGATTPKLLGAISRLVNLLDEPESIAVLAPLIKR 168

Query: 121 EIHYRLLLSDQAARLRQIVSVDSQGYRIAKAIDWLKLNYTEPVRVDDLAARVQMSAPTFH 180
           EI++R+L+S+Q ARLRQIVS  S G RIA+ I+WLK++Y + + VD LA   +MS  TFH
Sbjct: 169 EIYWRVLMSEQGARLRQIVSAGSHGLRIARTIEWLKVHYDQHLSVDSLADMARMSKSTFH 228

Query: 181 HHFRQLTAMSPLQYQKWLRLNEAKRLMLNEHVDVASAAFKVGYESPSQFSREYARLFGVP 240
           HHFR+LT+MSPLQYQK LRL EA+RLML E +D ++AA++VGYESPSQFSREY+RLFG  
Sbjct: 229 HHFRRLTSMSPLQYQKRLRLLEARRLMLGEDIDASAAAYRVGYESPSQFSREYSRLFGAS 288

Query: 241 PKRDIA 246
           PK+D+A
Sbjct: 289 PKKDVA 294