Pairwise Alignments

Query, 258 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  170 bits (431), Expect = 3e-47
 Identities = 98/245 (40%), Positives = 138/245 (56%)

Query: 5   SIVLVAQGEKQVWIGGEAYGYDTGRFLMTSLDIPANSEVLQASPEQPCLGLVLRLDLRMV 64
           S+ L+ QG KQV I         G+ ++T+ D+P  S V +A+   P +GLVL+LD  ++
Sbjct: 53  SLSLILQGSKQVAIDDRLRICSAGQSMLTTFDLPVISHVTEATRYHPFIGLVLKLDYGLI 112

Query: 65  ADLIAQGSLPPPRDRAVGIGAGIGTATPDLLAPFARLLGLLDEPDAIPILAPLIQREIHY 124
           A    + +L  P                 L    +RLLGL   P+ I  LA L ++EI  
Sbjct: 113 AQTCTELNLERPSKDLRYQAISTQDIDTGLCDAMSRLLGLHLTPEYIESLAQLYKKEIVI 172

Query: 125 RLLLSDQAARLRQIVSVDSQGYRIAKAIDWLKLNYTEPVRVDDLAARVQMSAPTFHHHFR 184
           RLL       LR + SV S   +I + + W+K N+ + + +++LA +  MSA  F  HF+
Sbjct: 173 RLLHGSHGMHLRHLASVGSPSRQIVQIVAWMKQNFAQAIGINELADKAHMSASAFRQHFK 232

Query: 185 QLTAMSPLQYQKWLRLNEAKRLMLNEHVDVASAAFKVGYESPSQFSREYARLFGVPPKRD 244
            LT  SPLQY K LRL EA+  ML   +D + A+  VGYESPSQFSREY+RLFG+PP++D
Sbjct: 233 ALTGSSPLQYLKHLRLQEARDQMLLNGLDASQASGVVGYESPSQFSREYSRLFGLPPQKD 292

Query: 245 IAALR 249
           I  LR
Sbjct: 293 IQRLR 297