Pairwise Alignments

Query, 264 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 269 a.a., exonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (397), Expect = 2e-43
 Identities = 99/266 (37%), Positives = 146/266 (54%), Gaps = 16/266 (6%)

Query: 4   LRIATFNINGIRARLPNLLEWLEREKPDIACLQELKAVDNDFPAAELESVGYGAIWHGQA 63
           ++I +FNING+RARL  L   ++   PDI  LQE K  D  FP AE+E++GY   +HG  
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 64  SWNGVAILARDAQPLESRRGLPGGDDDSHSR-----YLEAAVHGVLVGCLYLPNG-NPQP 117
           +  GVA+L++   P++ ++G P  DD++  R     + +A    + V   Y P G N   
Sbjct: 61  AHYGVAMLSK-LPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISH 119

Query: 118 GPKFDYKLAWFERLIDYAQGLQASDHPVVLAGDYNVVPTDMDI----YNPRSWLK--DAL 171
             K+  K  +++ L+ Y Q   + D  + + GD N+ P D+DI     N + WLK     
Sbjct: 120 ETKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCS 179

Query: 172 LQPESRACYQRLLDQGWTDSLRHLYP--DERVYTFWDYFRQHWQKNSGLRIDHLLLNPAA 229
            QPE R   Q LLD G  D+ R L+P   ER Y+++DY  + +  N GLRID +L  P+ 
Sbjct: 180 FQPEEREWLQTLLDWGLVDTFRQLHPTRSER-YSWFDYRSKGFDDNRGLRIDVILATPSL 238

Query: 230 SAYLSEAGVDAWVRNQPHPSDHAPTW 255
           +  L+E+ VD  +R    PSDHAP W
Sbjct: 239 AERLTESDVDYDLRGIDKPSDHAPIW 264