Pairwise Alignments

Query, 273 a.a., Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) from Pseudomonas fluorescens FW300-N2E2

Subject, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 80/262 (30%), Positives = 116/262 (44%), Gaps = 43/262 (16%)

Query: 27  HNHLYEQLGLNFYYKAFSSQDLPGAVG----GIRALGIRGCGVSMPFKEACIALVDELDP 82
           HN  +  L +   Y A+  +  PG VG     +R L IRG  V++P K+A + L+D +  
Sbjct: 28  HNWGFSLLDVPAVYMAWPLE--PGRVGDFITAVRTLPIRGASVTIPHKQAVLPLLDGVSD 85

Query: 83  SAAAIESINTIVNTNGHLKAYNTDYIAIAQLLQSHAVP--KDSTFALRGSGGMAKAVASA 140
            A A+ ++NT+   +G L   NTD       L+  A    +     + G+GG A+AV + 
Sbjct: 86  RARAVGAVNTLYWRDGQLLGENTDVTGFLAPLRQRAAAGWRCERALVLGNGGAARAVLAG 145

Query: 141 LR------DGGYQNGLIVARNEAAGRALAESLGYE---------WQADLGTRRPQMLINV 185
           LR      DG  +   +  RN      LA   G E         W ADL       ++N 
Sbjct: 146 LRELGPAGDGVVRAVGVTGRNAEKAAPLAAEFGAEVVDWDARVHWGADL-------VVNT 198

Query: 186 TPIGMTGGPEADQLAFEPETIVAAETV-----------FDVVAIPSETPLIVRARAEGKR 234
           TP+GM+G  + D  AF PE   AA+ V           +D+V  P  T  +  A   G  
Sbjct: 199 TPMGMSGERQGD-TAF-PEQGFAAQGVAAGGDGRRGLAYDLVYNPLRTRFLSEAADAGWD 256

Query: 235 VITGLEVIAIQALEQFVLYTGV 256
              GL +   Q  EQF L+TG+
Sbjct: 257 TQDGLGMFVEQGREQFRLWTGL 278