Pairwise Alignments

Query, 325 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 318 a.a., D-alanyl-D-alanine endopeptidase (RefSeq) from Shewanella sp. ANA-3

 Score =  349 bits (896), Expect = e-101
 Identities = 178/293 (60%), Positives = 231/293 (78%), Gaps = 2/293 (0%)

Query: 22  SLFIAFTG-SFITQNVAAQETIAAPRDTAKLQ-VASGSAMLLDLQTDKVVYSSNPDVVVP 79
           SL +A T  S  + +V  + T  A +   K Q VA+ SA+++DL+T++++YSSNPD V P
Sbjct: 16  SLTVAATAHSADSASVTTKSTATAKKAPVKQQEVAANSALVVDLKTNEILYSSNPDAVRP 75

Query: 80  IASVTKLMTGLIVLDAKQNLDEYISITIANTPEMKGVFSRVKLNSELSRRDVLLIALMSS 139
           IASVTKLMT ++ LDAK  +DE ++I I +T EM+GV+SRV++ SE+SR+D+LL+ LMSS
Sbjct: 76  IASVTKLMTAMVTLDAKLPMDEKLAININDTKEMRGVYSRVRIGSEISRKDMLLLTLMSS 135

Query: 140 ENRAAASLAHHYPGGYAAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLTKLLIA 199
           ENRAAASLAHHYPGG+ AFI AMNAKAKALGM +T YVEPTGLS  NVS+ARDL  LL A
Sbjct: 136 ENRAAASLAHHYPGGHKAFIKAMNAKAKALGMKNTRYVEPTGLSEKNVSSARDLVVLLKA 195

Query: 200 ARKYPLLSELSTTKEKTVTFRKPVYSLGFRNTDHLVHKANWDIQLTKTGFTNQAGHCLVL 259
           +  YP+L +LS+T++KTVTF KP YSL FRNT+ LV+K NW+I LTKTGFTN+AGHCLV+
Sbjct: 196 SEGYPMLGQLSSTEKKTVTFGKPKYSLDFRNTNRLVYKDNWNIHLTKTGFTNEAGHCLVM 255

Query: 260 VTKMGNRPMALVILDAFGKYTHFADASRIRSWVETGKSAAVPAVALQYKAAKN 312
            T+M  R +A V+LDA+GKYTH ADA+R+R+W+ETGK   +PA A QYK  ++
Sbjct: 256 RTEMAKRQVAFVVLDAYGKYTHMADANRLRNWLETGKVTPIPAEAKQYKKQRS 308