Pairwise Alignments

Query, 397 a.a., RND efflux system, membrane fusion protein CmeA from Pseudomonas fluorescens FW300-N2E2

Subject, 409 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum IBSBF1503

 Score =  345 bits (885), Expect = 1e-99
 Identities = 188/382 (49%), Positives = 260/382 (68%), Gaps = 6/382 (1%)

Query: 15  ILVCLIVLFMLGGCS---GESAPTPEPPKVSVITVQPQSQALTTELAGRTQAFMVAEIRP 71
           +L  L    +L  C    G   P    P V V+TVQPQ   L TEL GRT  F+VA++RP
Sbjct: 11  LLAALAAASLLAACGKPPGGPPPAEGTPVVGVMTVQPQRVTLDTELPGRTVPFLVADVRP 70

Query: 72  QVGGIVQQRLFVEGAEVKAGQALYQLDASSYKAALAEAQANLAKARATLKSAQATAKRDA 131
           QV GI++ R F EG++VKAG+ALYQ+D ++Y+AA     A LAKA+A LKS +  A+R  
Sbjct: 71  QVNGIIKARRFREGSDVKAGEALYQIDPATYRAAYDSNVAALAKAQANLKSTRLKAERYK 130

Query: 132 QLVKIDAISQQDNEDAQANLMTAEAEVQVAQADVDTARINLAYTRISSPVSGRVETSTVT 191
           +LV I A+S+QD +DA A L   EA+V  A+A+V+T+RINLAY R+ +P+SGR+  S+VT
Sbjct: 131 ELVSIQAVSRQDYDDAAAALAQGEADVAAARANVETSRINLAYARVDAPISGRIGRSSVT 190

Query: 192 PGALVVANQDSALTTVQQLDPMYVDVTQSTTELLRLKRDLASGVLQSNGEGEARIRLKLD 251
           PGALV ANQ ++L TVQQLDP+YVDVTQ +  LLRL++ +A G LQ +G   A ++L L+
Sbjct: 191 PGALVTANQTTSLATVQQLDPIYVDVTQPSAALLRLRQAMARGDLQKSGANAAAVQLLLE 250

Query: 252 DGSTYAHEGRLKFSGVSVNEGTGTVTLRAQIANPDRLLLPGMYVRAVLEQARDDKAILIP 311
           DGSTY   G+L+FS V+V++ TG+VTLRA   NP+ +LLPGMYVRAVL++   D+A+L+P
Sbjct: 251 DGSTYPLAGKLEFSDVTVDQNTGSVTLRAVFPNPNAILLPGMYVRAVLQEGVKDEALLVP 310

Query: 312 QKAVTRSASGATSVLVV-VDGKVEQRMLTIDRAVDNQWWVTAGLNAGDQVIVEGGQKVRV 370
           Q+AV R ++G     VV  D K+++R L  +R V +QW V +GL  GDQ++VEG  +   
Sbjct: 311 QQAVARDSTGKPFAYVVGGDRKLQRRALETERTVGDQWLVRSGLRVGDQLVVEGLPRAVP 370

Query: 371 GETVVAQNTGTRSRTQKATPVA 392
           G  V  + T    +T  ++P A
Sbjct: 371 GAEV--KTTPWTGKTATSSPAA 390