Pairwise Alignments

Query, 284 a.a., Transcriptional regulator, RpiR family from Pseudomonas fluorescens FW300-N2E2

Subject, 278 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 9e-12
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 16/234 (6%)

Query: 41  LADHAGVSDPTIVRLVKKLGFSGYAEFQDALLSDMDHRLRSPRTLLKPRAKLQQGDTWSQ 100
           LA +   S+ T+VRL + LG+ GY++F+ AL  D+       +  +        GD    
Sbjct: 44  LAFNTKTSEATVVRLCRDLGYKGYSDFRMALAVDLSQSANQSQPKM-------DGDICEV 96

Query: 101 YLAASQRNLIDTQALTQPEDVRILVQWLLDSRHQVHCFGGRFSSFLAHYLLNHLRLLRAG 160
              ++  +L+DT  L     +  + + L+     + C G   SS +  YL    RL+R G
Sbjct: 97  SAQSAVDSLMDTAKLIDRAALNRICE-LVHGAKFIGCVGVGASSIVGRYLA--YRLVRIG 153

Query: 161 CFAL--EDNAQLPDRLFDVQRQDVVLIFDYRRYQAQALRVASAAKERHARVVLFSDVYAS 218
             A+  ED              D            + +  A+ A +R   VV  +++  S
Sbjct: 154 KKAIMYEDTHLAAMSAGQSVVGDAWFAISSSGSTKEVVHAATQAHQRGVPVVSLTNISHS 213

Query: 219 PLRELAD--LIISAPVESIS--AFDSLVPALAQVEALIACLTLQCPELAERLEG 268
           PL  ++D  L+ + P   ++  AF S V AL  V+ LI  L    PE +  + G
Sbjct: 214 PLSSISDEMLVAARPEGPLTGGAFSSKVGALLLVDVLINTLLDVYPEYSASVFG 267