Pairwise Alignments

Query, 420 a.a., Signal transduction histidine kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 455 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  169 bits (427), Expect = 2e-46
 Identities = 131/460 (28%), Positives = 221/460 (48%), Gaps = 56/460 (12%)

Query: 4   PSRLFWKLFLAFWLATSLTFLVGLGLLVM----GSSRPGDPHLETVLATEEQLLRQFGIE 59
           P+R+F KL L+FWL +SL   + +GLL +        P  PHL+ +L   E+++ +  I+
Sbjct: 7   PNRIFIKLLLSFWLCSSLIIAI-VGLLPLLQQNHDQAPIPPHLQGLL---ERVVER--IQ 60

Query: 60  SGRQLLAV-----WEHPDDQA-----VGVYDSAGQLL------------------AGTPV 91
              +LL +     W    +         V D  GQL+                  AG P+
Sbjct: 61  ESPELLTMKRDKHWHRLKEMGNKPVRFYVADEQGQLINNQRVSRGIRRFMLMADEAGHPI 120

Query: 92  PQPAYERSIIGKDGIVLSLKSSHPLDKKGDRGPSHW---------TPLIIGTVMSALFSG 142
                   + G     +  K      +  +  P  W           L +  ++S L  G
Sbjct: 121 SHQFKSELLFGPMPFEIEGKRYTLYGRLAEMHPRPWFFFFAENIALTLTLAILLSGLLCG 180

Query: 143 YMAFYLAWPLAYLRRAMSDVAQGRFETRVKPIMGERRDEIVDLAEDCDRMANQLKLLVDA 202
            +A++L  PL  L+++   VA G    R       R+DEI  LA+  + MA+ ++ +V++
Sbjct: 181 LLAWHLGKPLRALKQSAEAVASGDLGHRADASTTARKDEIGQLAQSFNAMADAIESMVNS 240

Query: 203 QQHLLHDISHELRSPLTRMQAAIGLLQQDPARLEMVERIDRESVRMDTLIEALLTLARLQ 262
           QQ L+ DISHELR+PLTR+Q A+ L ++       ++RI  E+ +++ +I  LL L+R++
Sbjct: 241 QQRLISDISHELRTPLTRLQLALALTRKKGQASTEIDRIGYEAEQLEAMIAELLELSRVK 300

Query: 263 GRPESIEREPIDVVELLSVIVEDARFEAQMKGCQVTLQACPAFVSRVSGELLYRCFENVI 322
                  +  + + E L  +++DA FEA+ +   + +    + +  ++   L R  EN++
Sbjct: 301 LDIHE-HKHRLSLAETLGQVLDDAEFEAEQQQKSLVIDIDDSLMLMLNPRPLARAIENLL 359

Query: 323 RNAVRHTRPNTTVMVVAKVNGVADGLTVQISDQGAGVE-HSRLQSIFNPFER---GLNEV 378
           RNA+R+     ++   A+     + + + I D G G+E  + LQ+IF PF R        
Sbjct: 360 RNAIRYAEQEISISATAE----PEQVILTIKDDGPGIEDEADLQAIFEPFYRPQSARERE 415

Query: 379 SAGFGLGLAIASRSVEIHGGTILARNEPSGGLTVEISLPR 418
           S G+GLGLAIA  +++ H G I+A N    GL + I LPR
Sbjct: 416 SGGWGLGLAIAKAAIQAHQGQIVASNAAPHGLEITIRLPR 455