Pairwise Alignments

Query, 420 a.a., Signal transduction histidine kinase from Pseudomonas fluorescens FW300-N2E2

Subject, 438 a.a., osmolarity sensor protein EnvZ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (266), Expect = 9e-28
 Identities = 82/270 (30%), Positives = 143/270 (52%), Gaps = 19/270 (7%)

Query: 151 PLAYLRRAMSDVAQGRFETRVKPIMGERRDEIVDLAEDCDRMANQLKLLVDAQQHLLHDI 210
           PL  L++A   V++G F   + P+ G    E+V++    ++MA+ +K L   +  L+  I
Sbjct: 185 PLRRLQKAAISVSRGEFPDPL-PLKGS--SELVEVTNAFNQMAHSMKQLEQDRALLMAGI 241

Query: 211 SHELRSPLTRMQAAIGLLQQDPARLEMVERIDRESVRMDTLIEALLTLARLQGRPESIER 270
           SH+LR+PLTR++ A  ++ +D   L+  + I  +   MD +I   +   R   + +   R
Sbjct: 242 SHDLRTPLTRIRLASEMMVEDDQYLK--DGIVNDIEDMDAIISQFIAYIR---QDQEASR 296

Query: 271 EPIDVVELLSVIVEDARFEAQMKG-CQVTLQACPAFVSRVSGELLYRCFENVIRNAVRHT 329
           EP  + +L+  I   A+ EA   G  ++ L  CP  + +  G  + R   N++ NA R+ 
Sbjct: 297 EPGQINKLIQDI---AQAEANRDGEIELALADCPEALFQ--GLAIKRVLSNLVENAFRYG 351

Query: 330 RPNTTVMVVAKVNGVADGLTVQISDQGAGVEHSRLQSIFNPFERG-LNEVSAGFGLGLAI 388
             +  V + ++ +G   G +V+  D G G++ S++ ++F PF +G +   S G GLGLAI
Sbjct: 352 --SGWVRISSQFDGKRIGFSVE--DNGPGIDESQIPTLFQPFTQGDIARGSVGSGLGLAI 407

Query: 389 ASRSVEIHGGTILARNEPSGGLTVEISLPR 418
             R ++ H G I   N  +GGL  ++ LPR
Sbjct: 408 IKRIIDRHQGQITLSNRAAGGLKAQVWLPR 437