Pairwise Alignments

Query, 279 a.a., NAD-dependent protein deacetylase of SIR2 family from Pseudomonas fluorescens FW300-N2E2

Subject, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 46/238 (19%)

Query: 20  RRFLVLTGAGISTPSGIPDYRDSDGV---RRGRQPMMYQEFLAQAEARRRYWARAMLGWP 76
           +  +VLTGAGIS  SG+  +RD DG+            + +   AE   R++      W 
Sbjct: 3   QHIVVLTGAGISAESGLRTFRDQDGLWEEHHIEDVATPEGYAKDAELVERFYNSR---WE 59

Query: 77  RVR--QARPNVAHDALAQLQAQQRITG---LITQNVDTLHDQAGSQDVIELHGSLHRVLC 131
           ++      PN AH ALA+L+A+   +G   ++TQN+D LH++AGS+ ++ +HG L +  C
Sbjct: 60  QLHCGTVMPNAAHLALAKLEAE--FSGQLLVVTQNIDDLHERAGSRRLLHMHGELSKGRC 117

Query: 132 LDCGQRSERQQIQLSMEAQNPYLAGVDAVQAPDGDTLLDPAFEARFQVPNCPHCAGERLK 191
                   RQ   L    + P+  GV+     +G T   PA               +RL+
Sbjct: 118 -----PRSRQTFLL----REPF--GVN-----NGCTCCIPA---------------QRLR 146

Query: 192 PDVVFFGENVAPATATRATEAVQQADGLLVVGSSLMAYSAFRLCRAIKDQGKPLLVIN 249
           P VV+FGE   P    R  +A+   D  + +G+S   Y A          G   + +N
Sbjct: 147 PHVVWFGE--MPLGMDRIHDALDNCDLFIAIGTSGTVYPAAGFVDTANHHGAQTVEVN 202