Pairwise Alignments

Query, 540 a.a., Permeases of the major facilitator superfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 500 a.a., proline/betaine transporter from Klebsiella michiganensis M5al

 Score =  209 bits (532), Expect = 2e-58
 Identities = 123/325 (37%), Positives = 187/325 (57%), Gaps = 17/325 (5%)

Query: 21  QKVIFASSLGTVFEWYDFFLYGALAAVISKQFFAGVNDTTAFIFALMAFAAGFIVRPFGA 80
           +K I A+SLG   EW+DF +YG +A  + K FF   N +   I AL  F+  F++RP G 
Sbjct: 24  KKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPDANPSVQMIAALGTFSVPFLIRPLGG 83

Query: 81  LVFGRLGDMIGRKYTFLATIILMGVATFCVGLLPNYASIGIAAPIILVVLRMLQGLALGG 140
           L FG LGD  GR+     TI++M ++TFC+GL+P+YA+IGI API+L++ +M QG ++GG
Sbjct: 84  LFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGG 143

Query: 141 EYGGAATYVAEHAPMGKRGFHTSWIQSTATLGLLLSLLVVLGCRYFTGDQ-FEVWGWRIP 199
           EY GA+ +VAE++P  KRGF  SW+   +  G ++   VV+      G++ F  WGWRIP
Sbjct: 144 EYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGAGVVVLISSVVGEENFLSWGWRIP 203

Query: 200 FLLSILLLGISTWIRLSLHESPAF---LKMKEEG------KSCKAPIRESFGK-WENLKV 249
           F L++ L  I  ++R +L E+PAF   +   E+G      +  K   +E   K W +L  
Sbjct: 204 FFLALPLGIIGLYLRHALEETPAFQQHVDKMEQGDREGLQEGPKVSFKEIATKHWRSLLT 263

Query: 250 VLIALFSINAGQAVTFYAAQFYVLFFLTQFLKMDPALANSLLIVSVVIGAPFF-IFFGWL 308
            +  + S N    VT+Y    Y+  +L+  L         L+I+++++G  F     G L
Sbjct: 264 CIGLVISTN----VTYYMLLTYMPSYLSHNLHYSED-HGVLIIIAIMVGMLFVQPVIGML 318

Query: 309 SDKVGRKPVLMIGLLLATALYFPIF 333
           SD+ GR+P ++IG +   AL  P F
Sbjct: 319 SDRFGRRPFILIGSVALFALSIPAF 343



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 24/91 (26%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 442 MIVALIVALIIISAMCYGPLAALMVELFPTRIRYTSMSLPYHIGNGWFGGFLPTVSFALV 501
           +I A ++ L ++     G +A+ +  +FPT IR+++++  ++I +    G  PT++  LV
Sbjct: 353 LIFAGLLVLAVVLNCFIGVMASSLPAMFPTHIRFSALASAFNI-SVLIAGLTPTLAAWLV 411

Query: 502 VYTGDIFYGLWYPVVITGVSLVVGMICLRET 532
             T ++    +Y +VI  + L+ G + ++ET
Sbjct: 412 ESTQNLMMPAYYLMVIAVIGLITG-LSMKET 441