Pairwise Alignments

Query, 473 a.a., DNA polymerase-like protein PA0670 from Pseudomonas fluorescens FW300-N2E2

Subject, 684 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 3/225 (1%)

Query: 171 MPVERIGLEPDVATALSRMGLRRLSQVQALPRQTLARRFEAQVLKHLDALMGHRTLALSF 230
           +P+  + L   V  +   MGL ++  + ALP + L  RF   VL  L  L G       F
Sbjct: 292 LPLSILPLPEHVLQSCENMGLTQVQALLALPLKELGERFGESVLTLLAQLKGQLPQVHEF 351

Query: 231 YLPPDRFDVRIELNYDVQSHQALLFPLRRLTGDLSAFLCGRDSGVQRFDLHLEHAGLPDT 290
           YL P+ +  ++EL Y+V   + L FPL R+   LSA+L  R   V    L L    L   
Sbjct: 352 YLMPESYRHKLELLYEVSHLEGLAFPLGRMLATLSAYLVQRQQAVLALSLTLVFRDLSLV 411

Query: 291 VIK--VGLLSAERAPAMLFELARGRLEQVQVEAPVRGFRLCAEDLPSFVPQRLELFDERP 348
            ++  +    AE     L +L R +LE + + APV    + A+ L   + Q    +    
Sbjct: 412 PLRCEIRYPFAEHRGDALLKLCRVQLESLILAAPVISLAIQADTLVPLLVQTSNWWQGEG 471

Query: 349 QQSLPWEQLRERLRARLGDEAVQGLGFRDDHRPECAWQMTSQPRS 393
           +      +L   L ARLG + V+GL     H PE +WQ  S  +S
Sbjct: 472 KSDATM-RLLSLLEARLGADKVKGLEHCSHHLPELSWQSRSLSQS 515



 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)

Query: 400 DGVQRPGWLLEEPQALAQGQAHILMGPERIETGWWDGADVRRDYYLIETRRGQRGWAYRT 459
           DG  RP WLL +P+ LA     +L GPER+ + W   A   RDYYL    +G   W +R+
Sbjct: 616 DGRIRPNWLLRQPEPLAPESVSLLKGPERLHSPW--SAASPRDYYLARMHQGGLCWVFRS 673

Query: 460 VGEGGPLWLQGWF 472
             EG  L+LQGWF
Sbjct: 674 -PEG--LFLQGWF 683



 Score = 45.4 bits (106), Expect = 6e-09
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 1  MRWVCILFPQLALDAALRQRPDPDQPLALLTGPAQRRVLQAVNAPARALGLRPGQTMTAA 60
          M W+ + FP   L      +  P      L      ++L A +A A+ LG+ PGQ++  A
Sbjct: 1  MLWLAVYFPHWLLQYQSYHQGLPQGGELALFERQSSQILIASSAAAK-LGVEPGQSLATA 59

Query: 61 QALSKGFATAEYDAAQIEHWQQFLAAWAYRFSAQV 95
          QAL        YD +  +    +L  W+Y +SA+V
Sbjct: 60 QALCPSLQLLAYDPSLSQEASHWLCQWSYGYSARV 94