Pairwise Alignments

Query, 220 a.a., ABC transporter for D-Glucosamine Hydrochloride, permease component 1 (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  132 bits (333), Expect = 6e-36
 Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 2/207 (0%)

Query: 12  WVARDTLWAGFLTSVQCSLLAIVLGTLIGLVAGLVLTYGRTWMRAPFRFYVDLIRGTPVF 71
           W A   LW G  T++  SL++ VLG LIGL  GL        +R     Y++L+RGTP+ 
Sbjct: 112 WAAGPLLW-GLWTTLWLSLVSGVLGLLIGLATGLCRLSNNPTLRDLSTVYIELVRGTPLL 170

Query: 72  VLVLACFYMAPALGWQIGAFQAGVLGLTLFCGSHVAEIVRGALQALPRGQMEASQAIGLT 131
           V +   FY        +    AG+  L+LF G++VAEI+R  +Q++ RGQ EA++++GL+
Sbjct: 171 VQIFI-FYFFIGTVLNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLS 229

Query: 132 FYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEF 191
             QS+ +V+LPQA +++LP        +VK ++L+SVI + ELL S +++I  +F   E 
Sbjct: 230 AGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEI 289

Query: 192 YLFAGFLFFIINYAIELLGRHIEKRVA 218
                 L+ +IN  +  +   +E+R+A
Sbjct: 290 LFCVAGLYLLINLPLSKIASRLERRLA 316