Pairwise Alignments

Query, 220 a.a., ABC transporter for D-Glucosamine Hydrochloride, permease component 1 (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 219 a.a., glutamine ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  142 bits (357), Expect = 6e-39
 Identities = 82/212 (38%), Positives = 122/212 (57%), Gaps = 1/212 (0%)

Query: 6   SWLHELWVARDTLWAGFLTSVQCSLLAIVLGTLIGLVAGLVLTYGRTWMRAPFRFYVDLI 65
           S L  LWV+   L  G   ++  S L+I + T+ G++ G++ +    W+ A  R Y++L 
Sbjct: 4   SGLELLWVSLPQLGKGAAQTLSISFLSIAISTVGGVLYGVLCSLNSKWLNALLRVYLELF 63

Query: 66  RGTPVFVLVLACFYMAPAL-GWQIGAFQAGVLGLTLFCGSHVAEIVRGALQALPRGQMEA 124
           R  PV V +   F+  P   G  + +F   VL L+L+  S V E+VRGAL +LPRGQ EA
Sbjct: 64  RAIPVLVWLYLLFFGLPIFFGLSLPSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREA 123

Query: 125 SQAIGLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIAR 184
             +IGL+  Q  GYVLLPQAL+++ P  +N  T I+K S+L  +IGV +++   QQII R
Sbjct: 124 GLSIGLSGPQLFGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIER 183

Query: 185 TFMTLEFYLFAGFLFFIINYAIELLGRHIEKR 216
           T+ ++  Y      FF I Y +    R +E+R
Sbjct: 184 TYESVLIYGALFLFFFFICYPLSAASRVLERR 215