Pairwise Alignments

Query, 220 a.a., ABC transporter for D-Glucosamine Hydrochloride, permease component 1 (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 320 a.a., amino acid ABC transporter permease from Pseudomonas sp. BP01

 Score =  128 bits (321), Expect = 1e-34
 Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 2/207 (0%)

Query: 12  WVARDTLWAGFLTSVQCSLLAIVLGTLIGLVAGLVLTYGRTWMRAPFRFYVDLIRGTPVF 71
           W A    W G  T++  S+++  LG +IGL AGL        +R     YV+L+RGTP+ 
Sbjct: 113 WAAGPLAW-GLWTTLWLSVVSGALGLVIGLFAGLCRLSSNPTLRDLSTVYVELVRGTPLL 171

Query: 72  VLVLACFYMAPALGWQIGAFQAGVLGLTLFCGSHVAEIVRGALQALPRGQMEASQAIGLT 131
           V +   FY        +    AGV  L LF G++VAEIVR  +Q++ +GQ EA++++GL 
Sbjct: 172 VQIFI-FYFFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLN 230

Query: 132 FYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEF 191
             QS+ +V+LPQA +++LP        +VK ++L+SVI + EL  S ++ I  +F T E 
Sbjct: 231 AGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290

Query: 192 YLFAGFLFFIINYAIELLGRHIEKRVA 218
           +     L+ +IN  +  L   +E+R+A
Sbjct: 291 WFCVAGLYLLINLPLSHLASRLERRLA 317