Pairwise Alignments

Query, 395 a.a., Twitching motility protein PilT from Pseudomonas fluorescens FW300-N2E2

Subject, 370 a.a., twitching motility protein (RefSeq) from Shewanella loihica PV-4

 Score =  367 bits (943), Expect = e-106
 Identities = 189/357 (52%), Positives = 249/357 (69%), Gaps = 1/357 (0%)

Query: 25  MEIDPLLRILASQNGSDLYMSTGAPPCARFEGVLKPLGNEAFKVGDIARLAGSLMDAEQR 84
           ME+ P L+++  +  SDL+++ G PP A+ +G ++PL    F          +LM   QR
Sbjct: 1   MEVRPFLKVMVERKASDLFITAGFPPSAKVDGEVRPLAENPFTPAQSLEFVEALMTEAQR 60

Query: 85  LEFDRELEMNLAISLAGVGRFRVNIFKQRNDVSMVIRNVKLDIPRFEDLKLPRVLLDTIM 144
            EF    E N A    G+GRFRV+ F QR     V+R ++  IP  EDLKLP +L D +M
Sbjct: 61  KEFHETRECNFAYGEKGLGRFRVSAFWQRESPGCVMRRIETKIPLVEDLKLPPILKDLVM 120

Query: 145 QKQGLMLFVGATGSGKSTSLAALIDYRNRNSSGHIITIEDPVEYIHRHKKSIINQREVGV 204
            K+GL++ VG TG+GKSTSLAAL+ YRN ++ GHI+TIEDPVE++H H+KSII QREVG+
Sbjct: 121 SKRGLIIMVGGTGTGKSTSLAALVGYRNSHARGHILTIEDPVEFVHDHRKSIITQREVGI 180

Query: 205 DTRSFHAALKNTLRQAPDVVLIGEIRDRETMEHALAFADTGHLVISTLHAHNANQALDRV 264
           DT SF AALK++LRQAPDV+LIGEIR +ETME AL+FA+TGHL ++TLHA+NANQALDR+
Sbjct: 181 DTDSFDAALKSSLRQAPDVILIGEIRTQETMEFALSFAETGHLCMATLHANNANQALDRI 240

Query: 265 INFFPEERRPQLLNDLGNNLKAFVSQRLVRTRTGQ-RRAAVEVMLGSPTVADLIRRNELG 323
           ++  PE +  QLL DL  NL+  V+Q+LV    G  RRAA+EV++ +P VA +I++NEL 
Sbjct: 241 MHLVPESKHQQLLFDLSLNLRGIVAQQLVPKADGTGRRAAIEVLINTPRVASIIQKNELH 300

Query: 324 ELKGIMEKSEELGMQTFDHALFNLVVEGAIDEEEALKNADSANNLRLRLKLHTESGA 380
            LK  M KS E GMQTFD AL  L VEG I   +AL +ADS N+LRL +KL +   A
Sbjct: 301 LLKETMAKSNEQGMQTFDQALLKLYVEGEISYSDALHHADSPNDLRLMIKLQSSESA 357