Pairwise Alignments

Query, 395 a.a., Twitching motility protein PilT from Pseudomonas fluorescens FW300-N2E2

Subject, 345 a.a., twitching motility protein PilT (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  256 bits (654), Expect = 7e-73
 Identities = 132/340 (38%), Positives = 204/340 (60%)

Query: 25  MEIDPLLRILASQNGSDLYMSTGAPPCARFEGVLKPLGNEAFKVGDIARLAGSLMDAEQR 84
           MEI  LL        SDL++S G  P  R +G ++ +   A     +  L   +M+ +QR
Sbjct: 1   MEITELLAFSVKHKASDLHLSAGISPMIRVDGEVRKINLPALDHQGVHSLVYDIMNDKQR 60

Query: 85  LEFDRELEMNLAISLAGVGRFRVNIFKQRNDVSMVIRNVKLDIPRFEDLKLPRVLLDTIM 144
            +F+  LE++ +  +  + RFRVN F Q    + V R +  DI   E L  P +      
Sbjct: 61  KDFEEHLEIDFSFEVPNLARFRVNAFNQSRGAAAVFRTIPSDILSLEQLGAPEIFKKISS 120

Query: 145 QKQGLMLFVGATGSGKSTSLAALIDYRNRNSSGHIITIEDPVEYIHRHKKSIINQREVGV 204
             +GL+L  G TGSGKST+LAA++DY N N   HI+TIEDP+E++H++K+ +INQREV  
Sbjct: 121 FPRGLVLVTGPTGSGKSTTLAAMVDYINENRHDHILTIEDPIEFVHQNKQCLINQREVHR 180

Query: 205 DTRSFHAALKNTLRQAPDVVLIGEIRDRETMEHALAFADTGHLVISTLHAHNANQALDRV 264
            T SF+AAL++ LR+ PDV+L+GE+RD ET+  A+  A+TGHLV  TLH  +A + +DRV
Sbjct: 181 HTHSFNAALRSALREDPDVILVGEMRDLETIRLAMTAAETGHLVFGTLHTTSAAKTIDRV 240

Query: 265 INFFPEERRPQLLNDLGNNLKAFVSQRLVRTRTGQRRAAVEVMLGSPTVADLIRRNELGE 324
           ++ FP   +  +   L  +L+A +SQ L++   G R AA E+M+G+P + +LIR +++ +
Sbjct: 241 VDVFPAGEKDMVRTMLSESLQAVISQTLIKKIGGGRVAAHEIMMGTPAIRNLIREDKVAQ 300

Query: 325 LKGIMEKSEELGMQTFDHALFNLVVEGAIDEEEALKNADS 364
           +   ++     GMQT +  L NLV  G I  E+A+  + +
Sbjct: 301 MYSAIQTGMAHGMQTLEQCLQNLVNRGLITREDAMAKSSN 340