Pairwise Alignments

Query, 516 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

Subject, 818 a.a., topoisomerase IA from Dechlorosoma suillum PS

 Score =  239 bits (611), Expect = 2e-67
 Identities = 157/455 (34%), Positives = 233/455 (51%), Gaps = 17/455 (3%)

Query: 26  LFLCEKPSQGKDIARVLGARQRGSGCFKGVGISVTWCIGHLVEAAPPETYDERFKQWSLD 85
           L + EKPS  +DIA  LG   +    F+     V   +GHLVE A PE  D  F    L 
Sbjct: 5   LIIPEKPSVAQDIAAALGGFSKREDWFERDDAIVCSALGHLVELACPEAEDPGF---DLA 61

Query: 86  HLPILPISWRVRVKANTAAQYKIVKQLL-AQTSELVI-ATDADREGEMIAREVLELCQYR 143
            LP +P  + +   A T+A+  ++K+L+  Q  +LV+ A DA REGE+I R +   C  R
Sbjct: 62  RLPAIPSRFNLAPIAKTSARLSLLKKLMNRQDVQLVVNACDAGREGELIFRYIYLCCGCR 121

Query: 144 GSIQRLWLSALNDASIRKALSQLRQAEETQSLYHSALARSRADWLIGMNMSRLFTLL-GR 202
             +QR+W+ ++  A+I++A ++ R   E   L++SA +RS  DWL+G+N +R +++L  R
Sbjct: 122 KPMQRMWIQSMTPAAIKEAFAKRRPGAELDGLFNSAQSRSEGDWLVGINGTRAYSILETR 181

Query: 203 QAGLNGVLSVGRVQTPTLRLVVDRDREIERFVPRPYWVIQVKLEVLGQAFTAQW------ 256
             G   + +VGRVQTPTL L+V R+  I  F+ +PY+ IQ +       + A+W      
Sbjct: 182 VTGERTLSTVGRVQTPTLALIVAREEAIRSFIAKPYYEIQGEFAAKTGVYGAKWIDTAFQ 241

Query: 257 AAPDSATDEAGRCIRQAIALQAQQSFKATGVAQVLEVETQRTREAPPLPFDLNTLQEVCS 316
           A P +    A R   +A A            + V +  T  +   PP  FDL TLQ   +
Sbjct: 242 ADPSTPDARAERLFDKAKADAIVAKCTGKRPSSVADATTD-SISTPPKLFDLTTLQREAN 300

Query: 317 RRLGYGVQETLDIAQSLYETHKATTYPRTDSGYLPESMLLEAEAVFAALIKSDPGVGPLV 376
           ++ G+   +TL IAQ+LYE  K  TYPRTDS  LPE  L  A A    L      V P  
Sbjct: 301 KKFGFSASQTLAIAQALYEKQKVLTYPRTDSSALPEDYLDTARATLTRLGDGGLTVSPFA 360

Query: 377 QSVDFTLR--SRAWNDSQVSAHHGIIPTLEPFDRLALSERECAVYELIRARYLAQFLPPH 434
                 ++   R +N++++S H  IIPT        LS  E  +++L+  R++A F PP 
Sbjct: 361 AKAVAMVKPDKRIFNNAKISDHFAIIPT--GLVSATLSGEEAKIFDLVSRRFIAAFFPPA 418

Query: 435 EYDRTAVQLTCGNHVLKAHGKHVVESGWHRVLGSE 469
           +Y +T           +A G+ +VE GW  V G E
Sbjct: 419 KYLQTVRLTVVEQETFRASGRVLVEEGWLAVYGKE 453