Pairwise Alignments

Query, 516 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

Subject, 861 a.a., DNA topoisomerase III from Dechlorosoma suillum PS

 Score =  249 bits (636), Expect = 3e-70
 Identities = 162/469 (34%), Positives = 239/469 (50%), Gaps = 30/469 (6%)

Query: 25  RLFLCEKPSQGKDIARVLGARQRGSGCFKGVGISVTWCIGHLVEAAPPETYDERFKQWSL 84
           +L + EKPS   DIA+ LG   +    F+     ++  IGHL+E   PE Y+ +  +WS 
Sbjct: 4   QLIIAEKPSVAADIAKALGGFTKHDDYFESDNFVLSSAIGHLLELVIPEEYEVKRGKWSF 63

Query: 85  DHLPILPISWRVRVKANTAAQYKIVKQLLAQ--TSELVIATDADREGEMIAREVLELCQY 142
            HLP++P  + ++    T ++ K++ +L+ +     LV A DA REGE+I   +    + 
Sbjct: 64  AHLPVIPPHFELKPVEKTESRLKLLTKLIKRKDVDGLVNACDAGREGELIFNYIARHAKS 123

Query: 143 RGSIQRLWLSALNDASIRKALSQLRQAEETQSLYHSALARSRADWLIGMNMSRLFTLLGR 202
             ++QRLWL ++   +IR   ++LR+ EE Q L  +A+ RS +DWL+G+N +R  T    
Sbjct: 124 GKAVQRLWLQSMTPQAIRDGFARLRRGEEMQGLGDAAVCRSESDWLVGINGTRAMTAFNS 183

Query: 203 QAGLNGVLSVGRVQTPTLRLVVDRDREIERFVPRPYWVIQVKLEVLGQAFTAQW---AAP 259
           + G   + +VGRVQTPTL LVV+R+R+I  F  RPYW ++         +  +W   A  
Sbjct: 184 KTGGFHLTTVGRVQTPTLSLVVERERKIREFKARPYWEVEATFAAAAGEYKGKWFDEAFK 243

Query: 260 DSATDEAGRCIR-----QAIALQAQQSFKATGVAQVLEVETQRTREAPPLPFDLNTLQEV 314
               DE  R  R     +A ALQA    K  G    +  E + + +  PL FDL +LQ  
Sbjct: 244 GKDEDEHARADRLWDEARAKALQA----KCEGQPGEVSEEAKPSTQLSPLLFDLTSLQRE 299

Query: 315 CSRRLGYGVQETLDIAQSLYETHKATTYPRTDSGYLPESMLLEAEAVFAA-----LIK-S 368
            + R G+  + TL +AQ+LYE HK  TYPRTDS  LPE  L   +A         L K S
Sbjct: 300 ANSRFGFSAKNTLGLAQALYEKHKVLTYPRTDSRALPEDYLGTVQATLQMFNGENLTKGS 359

Query: 369 DPGV--------GPLVQSVDFTLRSRAWNDSQVSAHHGIIPTLEPFDRLALSERECAVYE 420
           D  V          +++S       R +N++++S H  IIPT +      LSE E  +Y+
Sbjct: 360 DTSVVDRYGIFANKILKSKWVVPNKRIFNNAKISDHFAIIPTTQAPKN--LSEPEQKLYD 417

Query: 421 LIRARYLAQFLPPHEYDRTAVQLTCGNHVLKAHGKHVVESGWHRVLGSE 469
           L+  R+LA F P  EY  T           K  GK +V  GW  + G E
Sbjct: 418 LVVKRFLAVFFPAAEYLITTRITRVAGEPFKTEGKVLVNPGWLAIYGRE 466