Pairwise Alignments

Query, 516 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

Subject, 873 a.a., DNA topoisomerase III (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  269 bits (688), Expect = 3e-76
 Identities = 173/477 (36%), Positives = 257/477 (53%), Gaps = 45/477 (9%)

Query: 26  LFLCEKPSQGKDIARVLGARQRGSGCFKGVGISVTWCIGHLVEAAPPETYDERFK-QWSL 84
           L + EKPS  +++A ++GA QR +G  +G    V+W +GHLV  A PE  D  +  +W+L
Sbjct: 5   LIIAEKPSVARELAPLVGATQRRAGFLEGPDHLVSWAVGHLVGIAEPEEQDPAWAGRWTL 64

Query: 85  DHLPILPISWRVRVKANTAAQYKIVKQLLA--QTSELVIATDADREGEMIAREVLELCQY 142
           D LP+LP  +R+RV   TA Q+ ++++LL   + + ++ ATDA REGE+I R +  + + 
Sbjct: 65  DQLPMLPPRFRLRVLPETADQFAVLRRLLTDERVTGVINATDAGREGELIFRRIYLMAEC 124

Query: 143 RGSIQRLWLSALNDASIRKALSQLRQAEETQSLYHSALARSRADWLIGMNMSRLFTLLGR 202
              ++RLW S + +  +RK+L++L    E ++L  ++ AR+ ADWL+GMN SRLFT+   
Sbjct: 125 AKPVRRLWASDMTEEGLRKSLARLLPDAEKRNLGLASFARAEADWLVGMNYSRLFTV--- 181

Query: 203 QAGLNGVLSVGRVQTPTLRLVVDRDREIERFVPRPYWVIQVKLEVLGQAFTAQW--AAPD 260
                G++SVGRVQTP L L+  R REIE+FVP+ +W ++      G+   AQ   AAPD
Sbjct: 182 --RTGGLVSVGRVQTPVLCLLTARRREIEQFVPQDFWTVEGVFTPGGKGRAAQGGVAAPD 239

Query: 261 SATD------EAGRCIRQAIALQAQQSFKA--------------------------TGVA 288
           ++ D       AG     A A  A  SF A                          TG  
Sbjct: 240 ASPDATADASPAGTQDTPAPASDAPDSFPAVWHRPPELRETRVDSEDEASAIANACTGRE 299

Query: 289 QVLE-VETQRTREAPPLPFDLNTLQEVCSRRLGYGVQETLDIAQSLYETHKATTYPRTDS 347
            V+E V ++   + PPLPFDL TLQ   + R G   ++TL  AQ+LYETHK  TYPRTDS
Sbjct: 300 GVVESVASKAGSQQPPLPFDLTTLQREANTRFGLSAKDTLAHAQALYETHKLITYPRTDS 359

Query: 348 GYLPESMLLEAEAVFAAL--IKSDPGVGPLVQSVDFTLRSRAWNDSQVSAHHGIIPTLEP 405
            +L + +  E    F A+  +  D  +  + +     ++    +D +V+ HH IIPT   
Sbjct: 360 RHLTKELFAEILNHFRAIHHLYPDETMLAVARIKSGKVKFPCVDDRKVTDHHAIIPTARK 419

Query: 406 FDRLALSERECAVYELIRARYLAQFLPPHEYDRTAVQLTCGNHVLKAHGKHVVESGW 462
            D   LS+ E  +YE+I  R++A F     +  + V +  G H   A GK   E GW
Sbjct: 420 GDPARLSQPERQIYEMICRRFIAAFCAEARFATSTVTVKVGEHAFIARGKVFKEKGW 476