Pairwise Alignments

Query, 378 a.a., Outer membrane protein romA from Pseudomonas fluorescens FW300-N2E2

Subject, 239 a.a., metallo-beta-lactamase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 67/264 (25%), Positives = 106/264 (40%), Gaps = 43/264 (16%)

Query: 96  QDIVVWLGHSSYFVQLGGQRILIDPVFSTYAAPIPGVNKAFEGTSLYTA--DDIPEIDAL 153
           Q  + W GHS++ V  GG  +LIDP               F+G  +  A  D I   D +
Sbjct: 2   QTRITWHGHSNFQVASGGTNVLIDPF--------------FDGNPVAAARWDAIDRPDLV 47

Query: 154 LISHDHYDHLDYPTVLALQPKVRKVIVGLGVGAHFERWGYDMGVVREADWNEV------I 207
           L++HDH DH+     +    K     +G  VG        + G+ RE   N +       
Sbjct: 48  LVTHDHGDHVGQAIDIC---KATGAKLGCVVGTDARL--VEAGLPRELVLNGIGFNIGGT 102

Query: 208 ALTPNVRVHVTTARHYSGRTFTRDQSLWVGFALVSPEQRLFF-SGDSGYGPHFAEIGQRM 266
                 R+ +T A H S      +  + VG+ +  P+   F+ +GD+G      E+  R+
Sbjct: 103 VECAGARITMTQAYHSS------ESGVPVGYIVTMPDGFTFYHAGDTGIFSEM-ELWGRL 155

Query: 267 GPFDYVAIDAGQYDPRWANVHMNPEQAAQAAKDLHARVLMQTHVGRFSIAPHDWDDPFKR 326
              D   +  G          M+P QAA A   L AR ++  H G F +   + +    R
Sbjct: 156 YAIDLALLPIG------GVFTMDPRQAALACSLLRARSVIPMHWGTFPVL--EQNTTRFR 207

Query: 327 MQVASQGQTFALWTPEIGRTVYLD 350
            Q+A+      L+    G ++ LD
Sbjct: 208 EQLANHAPDCRLFNMTPGESLTLD 231