Pairwise Alignments

Query, 347 a.a., ClpB protein from Pseudomonas fluorescens FW300-N2E2

Subject, 848 a.a., Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) from Mycobacterium tuberculosis H37Rv

 Score =  166 bits (420), Expect = 2e-45
 Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 30/286 (10%)

Query: 42  LRSRIVGQEHVMRVVEALLNVVKVDIGERERPLTVNLFMGPTGVGKTEIVRLLALAIHGR 101
           L  R++GQ+  +  V   +   +  + +  RP    +F+GPTGVGKTE+ + LA  +   
Sbjct: 568 LGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDD 627

Query: 102 ADAFCRIDMHTLAQEHYSAALTGAPPGYVGSKEGVSLFNSELIQGTYSRP-GIVLFDELE 160
             A  RIDM    ++H  A L GAPPGYVG + G      +L +    RP  +VLFDE+E
Sbjct: 628 ERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAG-----GQLTEAVRRRPYTVVLFDEIE 682

Query: 161 KASKEVVRSLLGILENGQLTLAGGSRTLDFRNSLIFMTSNIGARQATTYRERFSRGWRRW 220
           KA  +V   LL +L+ G+LT  G  RT+DFRN+++ +TSN+G+                 
Sbjct: 683 KAHPDVFDVLLQVLDEGRLT-DGHGRTVDFRNTILILTSNLGS----------------- 724

Query: 221 LGIAPQGEQAMLELALHAWFEPEFLNRIDRILVFQRIETQWLEALLQIELNKLNQRLGQH 280
                 G    +  A+ A F+PEF+NR+D +L+F+ +  + L  ++ I+L +L +RL Q 
Sbjct: 725 -----GGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQR 779

Query: 281 RRTLVLDVAASDWLCQK-HDPRFGARALTRRVRVELEPAIAECLLA 325
           R  L + + A  WL Q+  DP +GAR L R V+  +   +A+ LLA
Sbjct: 780 RLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLA 825