Pairwise Alignments

Query, 454 a.a., FIG002188: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 454 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  223 bits (569), Expect = 8e-63
 Identities = 148/395 (37%), Positives = 206/395 (52%), Gaps = 12/395 (3%)

Query: 1   MKRSNLASVLALAVLAGAVQSAFASEAGQLG-GAELTAFGAQRSGNADGSIPAYSDEPLS 59
           MK+  L S   +  L      A  SEA     G ELT  G +++GNADGSIPA+      
Sbjct: 1   MKKLTLLSAAVIVALTAPTAFAKVSEAEAAKLGTELTPLGGEKAGNADGSIPAWDGGITK 60

Query: 60  LPACYDKDEPTNFCDPW-NDKPIFTITPQNLSQYAERLTEGQKALFARYPE-YKMNVYQT 117
             A Y+K    +  DP+  DK  FTIT  N +QY + LTEGQ  LF  YP+ +KMNVYQT
Sbjct: 61  PVAGYEKG--MHHPDPFPGDKIEFTITNANKAQYKDNLTEGQLKLFDLYPDTFKMNVYQT 118

Query: 118 RRTVRFPQTYQDNTRKNVDACKTANAGVSIEGCYAGLPFPLPKTGNEVIWNHQLQYSPPL 177
           RRT   PQ   D T+ N    +    G  I G   G+PFP+P+ G E IWNH L++    
Sbjct: 119 RRTASVPQFVYDATKANASRAELVADGNGISGASIGVPFPIPQNGLEAIWNHVLRFRGVD 178

Query: 178 QANARSYLVDGSARRILL--NALKVLESSEFLDTTDNGPKGSGAEFWRVRFFVYDPARRN 235
              ARS     ++    L   A ++       + T +  K S   F+  +  V  PAR  
Sbjct: 179 VETARSQAAPTASGSYTLVETAEEIRFEYSRPEMTLDKLKESNTLFY-FKQVVTQPARLA 237

Query: 236 GEQTLARYQVSGE---QRAWQYLPGQRRVKLAPDLAYDTPSPVAGGITTMDQQRLILGKQ 292
           G   L +  +  E   ++AW Y  GQRRV+ AP++A+DTP  V+ G+ T D   +  G  
Sbjct: 238 GTALLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSP 297

Query: 293 DRYDFKYLGVEEKLINYNNFAVYDYKACSEDKLFTKSFPNPECIRWELHRVRVVEATLKP 352
            RY+++ LG +E  I YN++ ++  K    +++      NP+ +RWE HRV VV+A LK 
Sbjct: 298 VRYNWELLGKKEIYIPYNDYKLHSDK-LKYEQILKPGHINPDYVRWEKHRVWVVKAQLKE 356

Query: 353 GFRHLLPKRRFYIDEDASGAGTADSYDVTGKLIRI 387
           G RH+   R FY+DED+     AD YD   +L R+
Sbjct: 357 GMRHIYKTRVFYLDEDSWQVSMADMYDNRDELYRV 391