Pairwise Alignments

Query, 266 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella loihica PV-4

 Score =  132 bits (331), Expect = 1e-35
 Identities = 84/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)

Query: 1   VSHQLKHLEQLWGLQLFHRGN-SQHLTSAGAALAPIVREFFMKLEATLADLREQNGRQRL 59
           VSHQ+K LE+  GL+LF R N S  LT  G      +++ F++L      L  ++    L
Sbjct: 37  VSHQIKALEEYLGLKLFRRKNRSLLLTEEGQGYFLDIKDIFVQLADATDRLLARSAIGSL 96

Query: 60  SVSTTYSFALKWLLPRLPDLAKAHPEILLTLDSTDSPINFSTTDPDVAIRLGNGHFPSLF 119
           +VST+ SFA++WL+PRL + ++ +P+I + + + D   +  T D DVAI  G G++P L 
Sbjct: 97  TVSTSPSFAIQWLVPRLANFSENNPDIDVRIKAVDDETSSLTDDVDVAIYYGMGNWPGLR 156

Query: 120 SEFLFREQIFPVASPTLLARFGTPQTAAELLRYPLLTRDGAALVPKWEQWFAQVGVEVTS 179
           ++ L  E + PV SP LL+    P +    L++  L  D +     W+ WF Q G+   +
Sbjct: 157 ADKLRNEVLIPVCSPMLLSG-PKPLSQPSDLKHHTLLHDSSR--HDWQAWFRQCGINDIN 213

Query: 180 LKESIRYADTNMTIEAALLGQGIALARSGHVEAELNDGRLERLFELPCASPLAYYFVCPK 239
           + +   ++ +++ ++AA  GQG+AL  S     ++  GRL   F     S  AYY VC +
Sbjct: 214 VNQGPIFSHSSLVLQAAAHGQGVALGYSVLARPDIKAGRLVCPFPEVLVSKNAYYLVCQQ 273

Query: 240 GIETQPHITHFRRWLV 255
                  I  FR+W++
Sbjct: 274 NHAEIGKIVAFRKWML 289